CIS-BP Database: Catalog of Inferred Sequence Binding Preferences
Home
Tools
View cart
Bulk downloads
Database stats
Contact us
Help
Update Log
FAQ
Links
How to cite
VIT_06s0004g05260
(
Vitis vinifera
)
C2H2 ZF
TF Information
Pfam ID
Interpro ID
Gene ID
CIS-BP ID
Sequence source
Animal TF db
PF00096 (zf-C2H2)
IPR007087
VIT_06s0004g05260
T131458_2.00
Ensembl (2018-Dec-8)
Link out
Directly determined binding motifs
Name/Motif ID
Species
Forward
Reverse
Type/Study/Study ID
SR
Score
DBD
Identity
No direct experiments
Motifs from related TFs
Name/Motif ID
Species
Forward
Reverse
Type/Study/Study ID
SR
Score
DBD
Identity
No TFs with similar DNA binding domains
DNA Binding Domains
Protein ID
Domain
From
To
Sequence
VIT_06s0004g05260.t01
C2H2 ZF
30
52
YECTFCKRGFSTAQALGGHMNIH
Links
Other
C2H2 ZF
family TFs
Other
Vitis vinifera
TFs
89 Related TFs
Name
Species
Gene ID
Motif Evidence
SR
Score
Action
AMTR_s00012p00258620
Amborella trichopoda
AMTR_s00012p00258620
N
0.827
AMTR_s00009p00194700
Amborella trichopoda
AMTR_s00009p00194700
N
0.827
ORGLA07G0099100
Oryza glaberrima
ORGLA07G0099100
N
0.824
ORUFI07G11810
Oryza rufipogon
ORUFI07G11810
N
0.824
OS07G0417400
Oryza sativa
OS07G0417400
N
0.824
gene30215-v1.0-hybrid
Fragaria vesca
gene30215-v1.0-hybrid
N
0.824
OPUNC07G10480
Oryza punctata
OPUNC07G10480
N
0.824
ONIVA07G09640
Oryza nivara
ONIVA07G09640
N
0.824
OGLUM07G11160
Oryza glumaepatula
OGLUM07G11160
N
0.824
OLONG_012182
Oryza longistaminata
OLONG_012182
N
0.824
ONIVA07G09630
Oryza nivara
ONIVA07G09630
N
0.824
evm.TU.supercontig_44.98
Carica papaya
evm.TU.supercontig_44.98
N
0.824
Cla021877
Citrullus lanatus
Cla021877
N
0.824
PRUPE_ppa021945mg
Prunus persica
PRUPE_ppa021945mg
N
0.824
TCM_020819
Theobroma cacao
TCM_020819
N
0.824
Cagra.19122s0001
Capsella grandiflora
Cagra.19122s0001
N
0.824
Bostr.3148s0115
Boechera stricta
Bostr.3148s0115
N
0.824
Pm009419
Prunus mume
Pm009419
N
0.824
Carubv10028256m.g
Capsella rubella
Carubv10028256m.g
N
0.824
scaffold_800693.1
Arabidopsis lyrata
scaffold_800693.1
N
0.824
OB07G18110
Oryza brachyantha
OB07G18110
N
0.824
Eucgr.H00184
Eucalyptus grandis
Eucgr.H00184
N
0.824
Ciclev10006751m.g
Citrus clementina
Ciclev10006751m.g
N
0.824
PRUPE_ppa016491mg
Prunus persica
PRUPE_ppa016491mg
N
0.824
OBART07G11660
Oryza barthii
OBART07G11660
N
0.824
Bra027500
Brassica rapa
Bra027500
N
0.824
orange1.1g037433m.g
Citrus sinensis
orange1.1g037433m.g
N
0.824
Bo7g065530
Brassica oleracea
Bo7g065530
N
0.824
GLYMA20G34840
Glycine max
GLYMA20G34840
N
0.824
GLYMA10G32810
Glycine max
GLYMA10G32810
N
0.824
Gorai.011G172000
Gossypium raimondii
Gorai.011G172000
N
0.824
Bo9g059250
Brassica oleracea
Bo9g059250
N
0.824
MDP0000143134
Malus domestica
MDP0000143134
N
0.824
MTR_1g075430
Medicago truncatula
MTR_1g075430
N
0.824
GSMUA_Achr8G14360_001
Musa acuminata
GSMUA_Achr8G14360_001
N
0.824
BGIOSGA025569
Oryza indica
BGIOSGA025569
N
0.824
LPERR07G09750
Leersia perrieri
LPERR07G09750
N
0.824
Bra033683
Brassica rapa
Bra033683
N
0.824
PK22236.1
Cannabis sativa
PK22236.1
N
0.817
PDK_20s1360411g002
Phoenix dactylifera
PDK_20s1360411g002
N
0.817
orange1.1g044013m.g
Citrus sinensis
orange1.1g044013m.g
N
0.817
Cla006093
Citrullus lanatus
Cla006093
N
0.817
MTR_1g070250
Medicago truncatula
MTR_1g070250
N
0.817
Cucsa.016990
Cucumis sativus
Cucsa.016990
N
0.817
Ciclev10022375m.g
Citrus clementina
Ciclev10022375m.g
N
0.817
cassava32634.m1
Manihot esculenta
cassava32634.m1
N
0.814
Cucsa.117650
Cucumis sativus
Cucsa.117650
N
0.814
SapurV1A.0007s0800
Salix purpurea
SapurV1A.0007s0800
I
0.814
Lus10021213.g
Linum usitatissimum
Lus10021213.g
I
0.814
Lus10022204.g
Linum usitatissimum
Lus10022204.g
I
0.814
Pavir.Ba02387
Panicum virgatum
Pavir.Ba02387
I
0.814
Pavir.Bb00955
Panicum virgatum
Pavir.Bb00955
I
0.814
SapurV1A.0292s0190
Salix purpurea
SapurV1A.0292s0190
I
0.814
Si032478m.g
Setaria italica
Si032478m.g
I
0.814
Traes_2BS_0544D9D4B
Triticum aestivum
Traes_2BS_0544D9D4B
I
0.814
GRMZM2G443109
Zea mays
GRMZM2G443109
I
0.814
GLYMA12G06340
Glycine max
GLYMA12G06340
N
0.814
Traes_2AS_099955797
Triticum aestivum
Traes_2AS_099955797
I
0.814
Traes_2DS_035AA95E3
Triticum aestivum
Traes_2DS_035AA95E3
I
0.814
Sb02g009930
Sorghum bicolor
Sb02g009930
I
0.814
Cla008348
Citrullus lanatus
Cla008348
N
0.814
BRADI1G52490
Brachypodium distachyon
BRADI1G52490
I
0.814
GRMZM2G409452
Zea mays
GRMZM2G409452
I
0.814
TRIUR3_25222
Triticum urartu
TRIUR3_25222
I
0.814
MTR_4g064873
Medicago truncatula
MTR_4g064873
N
0.814
GSMUA_Achr11G02150_001
Musa acuminata
GSMUA_Achr11G02150_001
N
0.805
F775_00917
Aegilops tauschii
F775_00917
I
0.794
Pm002649
Prunus mume
Pm002649
N
0.776
chr1.CM0147.870.nc
Lotus japonicus
chr1.CM0147.870.nc
I
0.776
MTR_7g063220
Medicago truncatula
MTR_7g063220
I
0.776
GLYMA07G16290
Glycine max
GLYMA07G16290
I
0.766
POPTR_0016s10480
Populus trichocarpa
POPTR_0016s10480
I
0.766
PRUPE_ppb012667mg
Prunus persica
PRUPE_ppb012667mg
N
0.766
mgf024356m
Mimulus guttatus
mgf024356m
I
0.766
cassava4410.m1
Manihot esculenta
cassava4410.m1
N
0.764
28345.m000111
Ricinus communis
28345.m000111
N
0.764
Aquca_003_00162
Aquilegia coerulea
Aquca_003_00162
N
0.764
TCM_021876
Theobroma cacao
TCM_021876
N
0.764
Gorai.002G256500
Gossypium raimondii
Gorai.002G256500
N
0.764
Sb04g037590
Sorghum bicolor
Sb04g037590
I
0.760
OB02G44430
Oryza brachyantha
OB02G44430
I
0.760
GRMZM2G344974
Zea mays
GRMZM2G344974
I
0.760
Pavir.Ab03315
Panicum virgatum
Pavir.Ab03315
I
0.760
Si019563m.g
Setaria italica
Si019563m.g
I
0.760
Cucsa.321760
Cucumis sativus
Cucsa.321760
I
0.757
GRMZM2G000126
Zea mays
GRMZM2G000126
I
0.757
POPTR_0008s16390
Populus trichocarpa
POPTR_0008s16390
I
0.757
Lus10022206.g
Linum usitatissimum
Lus10022206.g
I
0.757
Cla008944
Citrullus lanatus
Cla008944
I
0.757