odd-2 (Caenorhabditis elegans)
C2H2 ZF

TF Information

Pfam ID Interpro ID Gene ID CIS-BP ID Sequence source Animal TF db
PF00096 (zf-C2H2) IPR007087 WBGene00003846 T131565_2.00 Ensembl (2018-Dec-8) Link out

Directly determined binding motifs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score
DBD
Identity
odd-2
M00618_2.00
Caenorhabditis elegans
NGCTACYGK

MCRGTAGCN
PBM
Narasimhan et al.(2015)
pTH9150
(Direct) (Direct)

Motifs from related TFs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score
DBD
Identity
Osr2
M00132_2.00
Mus musculus
NGCTWCYGNN

NNCRGWAGCN
PBM
Badis et al.(2009)
Osr2_1727
0.770 0.826
For this family, TFs with SR scores > 0.755 will likely have a similar motif

Experimental Constructs

Motif ID Domain From To Sequence
M00618_2.00 C2H2 ZF 51 73
M00618_2.00 C2H2 ZF 79 101
M00618_2.00 C2H2 ZF 107 129

DNA Binding Domains

Protein ID Domain From To Sequence
C34H3.2 C2H2 ZF 124 146
C34H3.2 C2H2 ZF 152 174
C34H3.2 C2H2 ZF 180 202

Links

Other C2H2 ZF family TFs
Other Caenorhabditis elegans TFs

69 Related TFs

Name Species Gene ID Motif Evidence SR
Score
Action
TRAES3BF090100100CFD_g Triticum aestivum TRAES3BF090100100CFD_g I 0.000
MLOC_19031 Hordeum vulgare MLOC_19031 I 0.000
TRIUR3_34281 Triticum urartu TRIUR3_34281 I 0.000
Traes_3AL_3160E1F30 Triticum aestivum Traes_3AL_3160E1F30 I 0.000
Traes_4AL_234E1CDF6 Triticum aestivum Traes_4AL_234E1CDF6 N 0.000
AMTR_s00004p00067720 Amborella trichopoda AMTR_s00004p00067720 N 0.000
Si038955m.g Setaria italica Si038955m.g N 0.000
Si038001m.g Setaria italica Si038001m.g N 0.000
Sb01g012870 Sorghum bicolor Sb01g012870 N 0.000
Traes_4DS_CFC487CE5 Triticum aestivum Traes_4DS_CFC487CE5 N 0.000
TRIUR3_13881 Triticum urartu TRIUR3_13881 N 0.000
cassava10020.m1 Manihot esculenta cassava10020.m1 N 0.000
Ciclev10017173m.g Citrus clementina Ciclev10017173m.g N 0.000
Eucgr.J01756 Eucalyptus grandis Eucgr.J01756 N 0.000
gene01596-v1.0-hybrid Fragaria vesca gene01596-v1.0-hybrid N 0.000
orange1.1g032690m.g Citrus sinensis orange1.1g032690m.g N 0.000
Pavir.J22786 Panicum virgatum Pavir.J22786 N 0.000
POPTR_0003s20860 Populus trichocarpa POPTR_0003s20860 N 0.000
POPTR_0001s03970 Populus trichocarpa POPTR_0001s03970 N 0.000
OS03G0657400 Oryza sativa OS03G0657400 N 0.000
BGIOSGA010118 Oryza indica BGIOSGA010118 N 0.000
F775_42487 Aegilops tauschii F775_42487 N 0.000
GRMZM2G149219 Zea mays GRMZM2G149219 N 0.000
GRMZM2G161411 Zea mays GRMZM2G161411 N 0.000
GSMUA_Achr3G30880_001 Musa acuminata GSMUA_Achr3G30880_001 N 0.000
LPERR03G23380 Leersia perrieri LPERR03G23380 N 0.000
MLOC_16746 Hordeum vulgare MLOC_16746 N 0.000
OB03G35830 Oryza brachyantha OB03G35830 N 0.000
OBART03G28190 Oryza barthii OBART03G28190 N 0.000
OGLUM03G28820 Oryza glumaepatula OGLUM03G28820 N 0.000
OMERI03G24810 Oryza meridionalis OMERI03G24810 N 0.000
ONIVA03G29220 Oryza nivara ONIVA03G29220 N 0.000
OPUNC03G25700 Oryza punctata OPUNC03G25700 N 0.000
ORGLA03G0260500 Oryza glaberrima ORGLA03G0260500 N 0.000
ORUFI03G29320 Oryza rufipogon ORUFI03G29320 N 0.000
SapurV1A.0081s0610 Salix purpurea SapurV1A.0081s0610 N 0.000