CIS-BP Database: Catalog of Inferred Sequence Binding Preferences
Home
Tools
View cart
Bulk downloads
Database stats
Contact us
Help
Update Log
FAQ
Links
How to cite
odd-2
(
Caenorhabditis elegans
)
C2H2 ZF
TF Information
Pfam ID
Interpro ID
Gene ID
CIS-BP ID
Sequence source
Animal TF db
PF00096 (zf-C2H2)
IPR007087
WBGene00003846
T131565_2.00
Ensembl (2018-Dec-8)
Link out
Directly determined binding motifs
Name/Motif ID
Species
Forward
Reverse
Type/Study/Study ID
SR
Score
DBD
Identity
odd-2
M00618_2.00
Caenorhabditis elegans
NGCTACYGK
MCRGTAGCN
PBM
Narasimhan et al.(2015)
pTH9150
(Direct)
(Direct)
Motifs from related TFs
Name/Motif ID
Species
Forward
Reverse
Type/Study/Study ID
SR
Score
DBD
Identity
Osr2
M00132_2.00
Mus musculus
NGCTWCYGNN
NNCRGWAGCN
PBM
Badis et al.(2009)
Osr2_1727
0.770
0.826
For this family, TFs with SR scores >
0.755
will likely have a similar motif
Experimental Constructs
Motif ID
Domain
From
To
Sequence
M00618_2.00
C2H2 ZF
51
73
FICKYCDRHFTKSYNLLIHERTH
M00618_2.00
C2H2 ZF
79
101
YSCDVCGKAFRRQDHLRDHKYIH
M00618_2.00
C2H2 ZF
107
129
FKCEICGKGFCQSRTLLVHRATH
DNA Binding Domains
Protein ID
Domain
From
To
Sequence
C34H3.2
C2H2 ZF
124
146
FICKYCDRHFTKSYNLLIHERTH
C34H3.2
C2H2 ZF
152
174
YSCDVCGKAFRRQDHLRDHKYIH
C34H3.2
C2H2 ZF
180
202
FKCEICGKGFCQSRTLLVHRATH
Links
Other
C2H2 ZF
family TFs
Other
Caenorhabditis elegans
TFs
69 Related TFs
Name
Species
Gene ID
Motif Evidence
SR
Score
Action
Invalid Input OrderBy