egrh-1 (Caenorhabditis elegans)
C2H2 ZF

TF Information

Pfam ID Interpro ID Gene ID CIS-BP ID Sequence source Animal TF db
PF00096 (zf-C2H2) IPR007087 WBGene00007772 T131578_2.00 Ensembl (2018-Dec-8) Link out
NCBI Gene Info:
Predicted to enable DNA-binding transcription factor activity, RNA polymerase II-specific and RNA polymerase II cis-regulatory region sequence-specific DNA binding activity. Involved in negative regulation of MAP kinase activity; negative regulation of oocyte maturation; and negative regulation of ovulation. Located in nucleus and perinuclear region of cytoplasm. Is expressed in several structures, including body wall musculature; hermaphrodite somatic gonadal cell; intestine; pharynx; and sperm. Human ortholog(s) of this gene implicated in Charcot-Marie-Tooth disease type 1D; Charcot-Marie-Tooth disease type 3; Charcot-Marie-Tooth disease type 4E; asthma; and motor peripheral neuropathy. Orthologous to several human genes including EGR1 (early growth response 1). [provided by Alliance of Genome Resources, Apr 2022]

Directly determined binding motifs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score
DBD
Identity
egrh-1
M00622_2.00
Caenorhabditis elegans
CSCCCMCR

YGKGGGSG
PBM
Narasimhan et al.(2015)
pTH9317
(Direct) (Direct)

Motifs from related TFs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score
DBD
Identity
No TFs with similar DNA binding domains

Experimental Constructs

Motif ID Domain From To Sequence
M00622_2.00 C2H2 ZF 51 75
M00622_2.00 C2H2 ZF 81 103
M00622_2.00 C2H2 ZF 109 131

DNA Binding Domains

Protein ID Domain From To Sequence
C27C12.2 C2H2 ZF 374 398
C27C12.2 C2H2 ZF 404 426

Links

Other C2H2 ZF family TFs
Other Caenorhabditis elegans TFs

Invalid Input OrderBy

10 Related TFs

Name Species Gene ID Motif Evidence SR
Score
Action