lsy-27 (Caenorhabditis elegans)
C2H2 ZF

TF Information

Pfam ID Interpro ID Gene ID CIS-BP ID Sequence source Animal TF db
PF00096 (zf-C2H2) IPR007087 WBGene00009834 T131585_2.00 Ensembl (2018-Dec-8) Link out

Directly determined binding motifs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score		 DBD
Identity
lsy-27
M00624_2.00		 Caenorhabditis elegans
NDGCTTHWNN
NNWDAAGCHN		 PBM
Narasimhan et al.(2015)
pTH10630		 (Direct) (Direct)

Motifs from related TFs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score		 DBD
Identity
For this family, TFs with SR scores > 0.755 will likely have a similar motif

Experimental Constructs

Motif ID Domain From To Sequence
M00624_2.00 C2H2 ZF 25 48
M00624_2.00 C2H2 ZF 52 75
M00624_2.00 C2H2 ZF 81 101

DNA Binding Domains

Protein ID Domain From To Sequence
F47H4.1a C2H2 ZF 25 48
F47H4.1a C2H2 ZF 52 75
F47H4.1a C2H2 ZF 81 101
F47H4.1b C2H2 ZF 6 29
F47H4.1b C2H2 ZF 35 55

Links

Other C2H2 ZF family TFs
Other Caenorhabditis elegans TFs

0 Related TFs

">No related TF found