ztf-29 (Caenorhabditis elegans)
C2H2 ZF

TF Information

Pfam ID Interpro ID Gene ID CIS-BP ID Sequence source Animal TF db
PF00096 (zf-C2H2) IPR007087 WBGene00013438 T131610_2.00 Ensembl (2018-Dec-8) Link out
NCBI Gene Info:
Predicted to enable DNA-binding transcription factor activity, RNA polymerase II-specific and sequence-specific DNA binding activity. Predicted to be involved in regulation of transcription by RNA polymerase II. Predicted to be active in nucleus. [provided by Alliance of Genome Resources, Apr 2022]

Directly determined binding motifs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score		 DBD
Identity
ztf-29
M00635_2.00		 Caenorhabditis elegans
NNGCTTNWNN
NNWNAAGCNN		 PBM
Narasimhan et al.(2015)
pTH10041		 (Direct) (Direct)

Motifs from related TFs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score		 DBD
Identity
For this family, TFs with SR scores > 0.755 will likely have a similar motif

Experimental Constructs

Motif ID Domain From To Sequence
M00635_2.00 C2H2 ZF 18 41
M00635_2.00 C2H2 ZF 45 68
M00635_2.00 C2H2 ZF 74 95

DNA Binding Domains

Protein ID Domain From To Sequence
Y66D12A.12 C2H2 ZF 18 41
Y66D12A.12 C2H2 ZF 45 68
Y66D12A.12 C2H2 ZF 74 95

Links

Other C2H2 ZF family TFs
Other Caenorhabditis elegans TFs

2 Related TFs

Name Species Gene ID Motif Evidence SR
Score		 Action
CRE01013 Caenorhabditis remanei CRE01013 I 0.804
CJA35773 Caenorhabditis japonica CJA35773 I 0.766