scrt-1 (Caenorhabditis elegans)
C2H2 ZF

TF Information

Pfam ID Interpro ID Gene ID CIS-BP ID Sequence source Animal TF db
PF00096 (zf-C2H2) IPR007087 WBGene00016948 T131623_2.00 Ensembl (2018-Dec-8) Link out

Directly determined binding motifs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score		 DBD
Identity
No direct experiments

Motifs from related TFs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score		 DBD
Identity
C55C2.1_CONSTRUCT
M00649_2.00 		PBM CONSTRUCTS
NHYDHHNNN
NNNDDHRDN		 PBM
Narasimhan et al.(2015)
pTH10623 		0.827 1.000
For this family, TFs with SR scores > 0.755 will likely have a similar motif

DNA Binding Domains

Protein ID Domain From To Sequence
C55C2.1 C2H2 ZF 94 116
C55C2.1 C2H2 ZF 122 144
C55C2.1 C2H2 ZF 150 171

Links

Other C2H2 ZF family TFs
Other Caenorhabditis elegans TFs

12 Related TFs

Name Species Gene ID Motif Evidence SR
Score		 Action
C55C2.1_CONSTRUCT PBM CONSTRUCTS C55C2.1_CONSTRUCT D 0.827
CRE30071 Caenorhabditis remanei CRE30071 I 0.824
CBG04163 Caenorhabditis briggsae CBG04163 I 0.808
nLs.2.1.2.g04589 Litomosoides sigmodontis nLs.2.1.2.g04589 I 0.765
nOo.2.0.1.g09798 Onchocerca ochengi nOo.2.0.1.g09798 I 0.765
WBGene00245863 Onchocerca volvulus WBGene00245863 I 0.765
WUBG_05161 Wuchereria bancrofti WUBG_05161 I 0.765
TCLT_0000703901 Thelazia callipaeda TCLT_0000703901 I 0.761
SMUV_0000156601 Syphacia muris SMUV_0000156601 I 0.761
EEL_0000427701 Elaeophora elaphi EEL_0000427701 I 0.761
CJA18229 Caenorhabditis japonica CJA18229 I 0.757
OESDEN_06135 Oesophagostomum dentatum OESDEN_06135 I 0.757