CIS-BP Database: Catalog of Inferred Sequence Binding Preferences
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ztf-16
(
Caenorhabditis elegans
)
C2H2 ZF
TF Information
Pfam ID
Interpro ID
Gene ID
CIS-BP ID
Sequence source
Animal TF db
PF00096 (zf-C2H2)
IPR007087
WBGene00019960
T131635_2.00
Ensembl (2018-Dec-8)
Link out
Directly determined binding motifs
Name/Motif ID
Species
Forward
Reverse
Type/Study/Study ID
SR
Score
DBD
Identity
ztf-16
M00644_2.00
Caenorhabditis elegans
NNYNHGGAWN
NWTCCDNRNN
PBM
Narasimhan et al.(2015)
pTH10805
(Direct)
(Direct)
Motifs from related TFs
Name/Motif ID
Species
Forward
Reverse
Type/Study/Study ID
SR
Score
DBD
Identity
For this family, TFs with SR scores >
0.755
will likely have a similar motif
Experimental Constructs
Motif ID
Domain
From
To
Sequence
M00644_2.00
C2H2 ZF
51
73
YQCDICKMQFSQKANMHRHRMRH
M00644_2.00
C2H2 ZF
79
101
YECRFCKKRFFRKDQMQEHSMTH
M00644_2.00
C2H2 ZF
108
133
FDCPVSQCNMQFSQHNALRAHLEETH
M00644_2.00
C2H2 ZF
142
164
SCKRCNLMFANSRRLLLHFQTRH
DNA Binding Domains
Protein ID
Domain
From
To
Sequence
R08E3.4a
C2H2 ZF
133
155
YQCDICKMQFSQKANMHRHRMRH
R08E3.4a
C2H2 ZF
161
183
YECRFCKKRFFRKDQMQEHSMTH
R08E3.4a
C2H2 ZF
190
215
FDCPVSQCNMQFSQHNALRAHLEETH
R08E3.4a
C2H2 ZF
224
246
SCKRCNLMFANSRRLLLHFQTRH
R08E3.4b
C2H2 ZF
133
155
YQCDICKMQFSQKANMHRHRMRH
R08E3.4b
C2H2 ZF
161
183
YECRFCKKRFFRKDQMQEHSMTH
R08E3.4b
C2H2 ZF
190
215
FDCPVSQCNMQFSQHNALRAHLEETH
R08E3.4b
C2H2 ZF
224
246
SCKRCNLMFANSRRLLLHFQTRH
Links
Other
C2H2 ZF
family TFs
Other
Caenorhabditis elegans
TFs
1 Related TFs
Name
Species
Gene ID
Motif Evidence
SR
Score
Action