COM2 (Saccharomyces cerevisiae)
C2H2 ZF

TF Information

Pfam ID Interpro ID Gene ID CIS-BP ID Sequence source Animal TF db
PF00096 (zf-C2H2) IPR007087 YER130C T131834_2.00 Ensembl (2018-Dec-8) Link out

Directly determined binding motifs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score		 DBD
Identity
COM2
M00024_2.00		 Saccharomyces cerevisiae
VCCCCTDT
AHAGGGGB		 PBM
Badis et al.(2008)
YER130C_2103		 (Direct) (Direct)
COM2
M01530_2.00		 Saccharomyces cerevisiae
YYYYKNWHN
NDWNMRRRR		 PBM
Zhu et al.(2009)
Yer130c		 (Direct) (Direct)
COM2
M07454_2.00		 Saccharomyces cerevisiae
NCCCCTWTH
DAWAGGGGN		 PBM, CSA and or DIP-chip
Mathelier et al.(2014)
MA0423.1		 (Direct) (Direct)
COM2
M08521_2.00		 Saccharomyces cerevisiae
NCCCCTWTH
DAWAGGGGN		 Misc
DeBoer et al.(2011)
YER130C_534		 (Direct) (Direct)

Motifs from related TFs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score		 DBD
Identity
KLLA0_C17072g
M01038_2.00 		Kluyveromyces lactis
CYCCTDDNN
NNHHAGGRG		 PBM
Siggers et al.(2014)
KLL0C17072gKlac 		0.771 0.804
For this family, TFs with SR scores > 0.755 will likely have a similar motif

Experimental Constructs

Motif ID Domain From To Sequence
M00024_2.00 C2H2 ZF 51 74
M00024_2.00 C2H2 ZF 80 102
M01530_2.00 C2H2 ZF 389 412
M01530_2.00 C2H2 ZF 418 440

DNA Binding Domains

Protein ID Domain From To Sequence
YER130C C2H2 ZF 389 412
YER130C C2H2 ZF 418 440

Links

Other C2H2 ZF family TFs
Other Saccharomyces cerevisiae TFs

Invalid Input OrderBy

24 Related TFs

Name Species Gene ID Motif Evidence SR
Score		 Action