CIS-BP Database: Catalog of Inferred Sequence Binding Preferences
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FZF1
(
Saccharomyces cerevisiae
)
C2H2 ZF
TF Information
Pfam ID
Interpro ID
Gene ID
CIS-BP ID
Sequence source
Animal TF db
PF00096 (zf-C2H2)
IPR007087
YGL254W
T131838_2.00
Ensembl (2018-Dec-8)
Link out
Directly determined binding motifs
Name/Motif ID
Species
Forward
Reverse
Type/Study/Study ID
SR
Score
DBD
Identity
FZF1
M00028_2.00
Saccharomyces cerevisiae
NHCTATCAWN
NWTGATAGDN
PBM
Badis et al.(2008)
FZF1_4526
(Direct)
(Direct)
FZF1
M07458_2.00
Saccharomyces cerevisiae
CTATCA
TGATAG
PBM, CSA and or DIP-chip
Mathelier et al.(2014)
MA0298.1
(Direct)
(Direct)
FZF1
M08526_2.00
Saccharomyces cerevisiae
CGTATCGTATAAGGCAACAATAG
CTATTGTTGCCTTATACGATACG
Misc
DeBoer et al.(2011)
YGL254W_69
(Direct)
(Direct)
Motifs from related TFs
Name/Motif ID
Species
Forward
Reverse
Type/Study/Study ID
SR
Score
DBD
Identity
For this family, TFs with SR scores >
0.755
will likely have a similar motif
Experimental Constructs
Motif ID
Domain
From
To
Sequence
M00028_2.00
C2H2 ZF
11
35
YKCSFDGCEKVYNRPSLLQQHQNSH
M00028_2.00
C2H2 ZF
41
65
YHCDEPGCGKKFIRPCHLRVHKWTH
M00028_2.00
C2H2 ZF
72
93
ACTLCQKRFVTNQQLRRHLNSH
M00028_2.00
C2H2 ZF
154
179
LQCPYKSCQKVTSFNDDLINHMLQHH
DNA Binding Domains
Protein ID
Domain
From
To
Sequence
YGL254W
C2H2 ZF
12
36
YKCSFDGCEKVYNRPSLLQQHQNSH
YGL254W
C2H2 ZF
42
66
YHCDEPGCGKKFIRPCHLRVHKWTH
YGL254W
C2H2 ZF
73
94
ACTLCQKRFVTNQQLRRHLNSH
YGL254W
C2H2 ZF
155
180
LQCPYKSCQKVTSFNDDLINHMLQHH
Links
Other
C2H2 ZF
family TFs
Other
Saccharomyces cerevisiae
TFs
0 Related TFs
">No related TF found