YQE_05719 (Dendroctonus ponderosae)
C2H2 ZF

TF Information

Pfam ID Interpro ID Gene ID CIS-BP ID Sequence source Animal TF db
PF00096 (zf-C2H2) IPR007087 YQE_05719 T131934_2.00 Ensembl (2018-Dec-8) Link out

Directly determined binding motifs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score
DBD
Identity
No direct experiments

Motifs from related TFs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score
DBD
Identity
sob
M03674_2.00
Drosophila melanogaster
RCTACYGNRTTACGCV

BGCGTAAYNCRGTAGY
SELEX
Nitta et al.(2015)
sob_1
0.821 0.965
sob
M03675_2.00
Drosophila melanogaster
NGCGTAABNSNRGTAGY

RCTACYNSNVTTACGCN
SELEX
Nitta et al.(2015)
sob_2
0.821 0.965
sob
M06088_2.00
Drosophila melanogaster
GCTWCTGBDNBDV

BHVNHVCAGWAGC
B1H
Zhu et al.(2011)
sob_SANGER_10_FBgn0004892
0.821 0.965
sob
M06089_2.00
Drosophila melanogaster
BDGCTACYGKDBNN

NNVHMCRGTAGCHV
B1H
Zhu et al.(2011)
sob_SOLEXA_5_FBgn0004892
0.821 0.965
bowl
M03676_2.00
Drosophila melanogaster
GCGTAABACNRGKAGYN

NRCTMCYNGTVTTACGC
SELEX
Nitta et al.(2015)
bowl_1
0.813 0.965
bowl
M03677_2.00
Drosophila melanogaster
NGCTACYGTRTTACGCN

NGCGTAAYACRGTAGCN
SELEX
Nitta et al.(2015)
bowl_2
0.813 0.965
bowl
M06090_2.00
Drosophila melanogaster
RCTWCYGK

MCRGWAGY
B1H
Zhu et al.(2011)
bowl_SANGER_5_FBgn0004893
0.813 0.965
OSR2
M04521_2.00
Homo sapiens
NGCTACYGBD

HVCRGTAGCN
SELEX
Yin et al.(2017)
OSR2_eDBD_HT-SELEX
0.797 0.904
OSR2
M08324_2.00
Homo sapiens
NBDGCTNCTGN

NCAGNAGCHVN
ChIP-seq
Schmitges et al.(2016)
Q8N2R0.MEME
0.797 0.904
OSR2
M08908_2.00
Homo sapiens
NBHNYWGCTNCTSHDB

VHDSAGNAGCWRNDVN
Misc
Kulakovskiy et al.(2013)
OSR2_HUMAN.H11MO.0.C
0.797 0.904
OSR2
M04522_2.00
Homo sapiens
NGCTACTGND

HNCAGTAGCN
SELEX
Yin et al.(2017)
OSR2_eDBD_Methyl-HT-SELEX
0.797 0.904
For this family, TFs with SR scores > 0.755 will likely have a similar motif

DNA Binding Domains

Protein ID Domain From To Sequence
ENN77836 C2H2 ZF 265 287
ENN77836 C2H2 ZF 293 315
ENN77836 C2H2 ZF 321 343
ENN77836 C2H2 ZF 349 371
ENN77836 C2H2 ZF 377 399

Links

Other C2H2 ZF family TFs
Other Dendroctonus ponderosae TFs

Invalid Input OrderBy

111 Related TFs

Name Species Gene ID Motif Evidence SR
Score
Action