CIS-BP Database: Catalog of Inferred Sequence Binding Preferences
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YQE_07640
(
Dendroctonus ponderosae
)
C2H2 ZF
TF Information
Pfam ID
Interpro ID
Gene ID
CIS-BP ID
Sequence source
Animal TF db
PF00096 (zf-C2H2)
IPR007087
YQE_07640
T132002_2.00
Ensembl (2018-Dec-8)
Link out
Directly determined binding motifs
Name/Motif ID
Species
Forward
Reverse
Type/Study/Study ID
SR
Score
DBD
Identity
No direct experiments
Motifs from related TFs
Name/Motif ID
Species
Forward
Reverse
Type/Study/Study ID
SR
Score
DBD
Identity
esg
M06050_2.00
Drosophila melanogaster
CACCTGH
DCAGGTG
B1H
Zhu et al.(2011)
esg_SANGER_2.5_FBgn0001981
0.790
0.848
wor
M03664_2.00
Drosophila melanogaster
GYRACAGGTGYAH
DTRCACCTGTYRC
SELEX
Nitta et al.(2015)
wor_1
0.767
0.812
wor
M03665_2.00
Drosophila melanogaster
DTRCACCTGTYGY
RCRACAGGTGYAH
SELEX
Nitta et al.(2015)
wor_2
0.767
0.812
wor
M06051_2.00
Drosophila melanogaster
CACCTGY
RCAGGTG
B1H
Zhu et al.(2011)
wor_SANGER_2.5_FBgn0001983
0.767
0.812
wor
M06052_2.00
Drosophila melanogaster
VCACCTGY
RCAGGTGB
B1H
Zhu et al.(2011)
wor_SOLEXA_2.5_FBgn0001983
0.767
0.812
For this family, TFs with SR scores >
0.755
will likely have a similar motif
DNA Binding Domains
Protein ID
Domain
From
To
Sequence
ENN75804
C2H2 ZF
171
193
HHCPDCGKSYSTFSGLTKHRQFH
ENN75804
C2H2 ZF
205
226
NCTYCHKVYNSLGALKMHIRTH
ENN75804
C2H2 ZF
230
252
CKCTICGKAFSRPWLLQGHIRTH
ENN75804
C2H2 ZF
258
280
FSCTYCNRAFADRSNLRAHLQTH
ENN75804
C2H2 ZF
286
306
YSCPRCSKTFSRMSLLTKHSE
Links
Other
C2H2 ZF
family TFs
Other
Dendroctonus ponderosae
TFs
43 Related TFs
Name
Species
Gene ID
Motif Evidence
SR
Score
Action
Invalid Input OrderBy