CIS-BP Database: Catalog of Inferred Sequence Binding Preferences
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YQE_09824
(
Dendroctonus ponderosae
)
C2H2 ZF
TF Information
Pfam ID
Interpro ID
Gene ID
CIS-BP ID
Sequence source
Animal TF db
PF00096 (zf-C2H2)
IPR007087
YQE_09824
T132049_2.00
Ensembl (2018-Dec-8)
Link out
Directly determined binding motifs
Name/Motif ID
Species
Forward
Reverse
Type/Study/Study ID
SR
Score
DBD
Identity
No direct experiments
Motifs from related TFs
Name/Motif ID
Species
Forward
Reverse
Type/Study/Study ID
SR
Score
DBD
Identity
klu
M03680_2.00
Drosophila melanogaster
HCCRCCCACGCAH
DTGCGTGGGYGGD
SELEX
Nitta et al.(2015)
klu_1
0.807
0.935
klu
M03681_2.00
Drosophila melanogaster
YMCGCCCMCGCAH
DTGCGKGGGCGKR
SELEX
Nitta et al.(2015)
klu_2
0.807
0.935
klu
M06114_2.00
Drosophila melanogaster
MCACCCMCRCA
TGYGKGGGTGK
B1H
Zhu et al.(2011)
klu_SANGER_10_FBgn0013469
0.807
0.935
klu
M06115_2.00
Drosophila melanogaster
NNNNMCACCCMCRCN
NGYGKGGGTGKNNNN
B1H
Zhu et al.(2011)
klu_SOLEXA_5_FBgn0013469
0.807
0.935
For this family, TFs with SR scores >
0.755
will likely have a similar motif
DNA Binding Domains
Protein ID
Domain
From
To
Sequence
ENN73576
C2H2 ZF
360
383
FVCPVCGQMFSLHDRLAKHMASRH
ENN73576
C2H2 ZF
397
419
YLCEVCKRSFARSDMLTRHMRLH
ENN73576
C2H2 ZF
425
447
YTCRVCGQVFSRSDHLSTHQRTH
ENN73576
C2H2 ZF
453
475
YKCPQCPYAACRRDMITRHMRTH
Links
Other
C2H2 ZF
family TFs
Other
Dendroctonus ponderosae
TFs
66 Related TFs
Name
Species
Gene ID
Motif Evidence
SR
Score
Action
Invalid Input OrderBy