YQE_09824 (Dendroctonus ponderosae)
C2H2 ZF

TF Information

Pfam ID Interpro ID Gene ID CIS-BP ID Sequence source Animal TF db
PF00096 (zf-C2H2) IPR007087 YQE_09824 T132049_2.00 Ensembl (2018-Dec-8) Link out

Directly determined binding motifs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score
DBD
Identity
No direct experiments

Motifs from related TFs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score
DBD
Identity
klu
M03680_2.00
Drosophila melanogaster
HCCRCCCACGCAH

DTGCGTGGGYGGD
SELEX
Nitta et al.(2015)
klu_1
0.807 0.935
klu
M03681_2.00
Drosophila melanogaster
YMCGCCCMCGCAH

DTGCGKGGGCGKR
SELEX
Nitta et al.(2015)
klu_2
0.807 0.935
klu
M06114_2.00
Drosophila melanogaster
MCACCCMCRCA

TGYGKGGGTGK
B1H
Zhu et al.(2011)
klu_SANGER_10_FBgn0013469
0.807 0.935
klu
M06115_2.00
Drosophila melanogaster
NNNNMCACCCMCRCN

NGYGKGGGTGKNNNN
B1H
Zhu et al.(2011)
klu_SOLEXA_5_FBgn0013469
0.807 0.935
For this family, TFs with SR scores > 0.755 will likely have a similar motif

DNA Binding Domains

Protein ID Domain From To Sequence
ENN73576 C2H2 ZF 360 383
ENN73576 C2H2 ZF 397 419
ENN73576 C2H2 ZF 425 447
ENN73576 C2H2 ZF 453 475

Links

Other C2H2 ZF family TFs
Other Dendroctonus ponderosae TFs

Invalid Input OrderBy

66 Related TFs

Name Species Gene ID Motif Evidence SR
Score
Action