Aan_R008070 (Calypte anna)
C2H2 ZF

TF Information

Pfam ID Interpro ID Gene ID CIS-BP ID Sequence source
PF00096 (zf-C2H2) IPR007087 Aan_R008070 T132598_2.00 GigaDB (2015-Oct-22)

Directly determined binding motifs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score
DBD
Identity
No direct experiments

Motifs from related TFs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score
DBD
Identity
ZBTB43
M04533_2.00
Homo sapiens
NGTGCCHHNNNNNYAGCACN

NGTGCTRNNNNNDDGGCACN
SELEX
Yin et al.(2017)
ZBTB43_eDBD_HT-SELEX
0.827 1.000
ZBTB43
M04534_2.00
Homo sapiens
NGTGCCHHDNNNNYAGYACN

NGTRCTRNNNNHDDGGCACN
SELEX
Yin et al.(2017)
ZBTB43_eDBD_Methyl-HT-SELEX
0.827 1.000
For this family, TFs with SR scores > 0.755 will likely have a similar motif

DNA Binding Domains

Protein ID Domain From To Sequence
Aan_R008070 C2H2 ZF 371 391
Aan_R008070 C2H2 ZF 397 419

Links

Other C2H2 ZF family TFs
Other Calypte anna TFs

34 Related TFs

Name Species Gene ID Motif Evidence SR
Score
Action
fgenesh2_pg.scaffold_2722000001 Branchiostoma floridae fgenesh2_pg.scaffold_2722000001 N 0.000
fgenesh2_pg.scaffold_326000044 Branchiostoma floridae fgenesh2_pg.scaffold_326000044 N 0.000