Aan_R014383 (Calypte anna)
C2H2 ZF

TF Information

Pfam ID Interpro ID Gene ID CIS-BP ID Sequence source
PF00096 (zf-C2H2) IPR007087 Aan_R014383 T132680_2.00 GigaDB (2015-Oct-22)

Directly determined binding motifs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score
DBD
Identity
No direct experiments

Motifs from related TFs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score
DBD
Identity
HINFP
M02907_2.00
Homo sapiens
BVRCGTCCGCNN

NNGCGGACGYBV
SELEX
Jolma et al.(2013)
HINFP1_1
0.761 0.919
HINFP
M02908_2.00
Homo sapiens
GCGGACGYTRSRRCGTCCGC

GCGGACGYYSYARCGTCCGC
SELEX
Jolma et al.(2013)
HINFP1_2
0.761 0.919
HINFP
M02909_2.00
Homo sapiens
GCGGACSBKSVRCGTCCGC

GCGGACGYBSMVSGTCCGC
SELEX
Jolma et al.(2013)
HINFP1_3
0.761 0.919
HINFP
M08918_2.00
Homo sapiens
BWACGTCCGHBDNSNH

DNSNHVDCGGACGTWV
Misc
Kulakovskiy et al.(2013)
HINFP_HUMAN.H11MO.0.C
0.761 0.919
HINFP
M10262_2.00
Homo sapiens Transfac license required
Transfac license required
Transfac
Matys et al.(2006)
V$MIZF_01
0.761 0.919
For this family, TFs with SR scores > 0.755 will likely have a similar motif

DNA Binding Domains

Protein ID Domain From To Sequence
Aan_R014383 C2H2 ZF 150 172
Aan_R014383 C2H2 ZF 179 199
Aan_R014383 C2H2 ZF 208 230
Aan_R014383 C2H2 ZF 234 257
Aan_R014383 C2H2 ZF 263 285
Aan_R014383 C2H2 ZF 324 347

Links

Other C2H2 ZF family TFs
Other Calypte anna TFs

27 Related TFs

Name Species Gene ID Motif Evidence SR
Score
Action
HINFP Callithrix jacchus ENSCJAG00000013942 I 0.761
HINFP Cavia porcellus ENSCPOG00000006488 I 0.796
ENSCSAG00000002522 Chlorocebus sabaeus ENSCSAG00000002522 I 0.761
HINFP Dasypus novemcinctus ENSDNOG00000025019 N 0.778
HINFP Equus caballus ENSECAG00000024938 I 0.806
HINFP Homo sapiens ENSG00000172273 D 0.761
HINFP Gorilla gorilla ENSGGOG00000008087 I 0.761
HINFP Loxodonta africana ENSLAFG00000017500 I 0.808
ENSMEUG00000015482 Macropus eugenii ENSMEUG00000015482 I 0.825
HINFP Microcebus murinus ENSMICG00000002733 I 0.800
HINFP Myotis lucifugus ENSMLUG00000000455 I 0.796
HINFP Macaca mulatta ENSMMUG00000014877 I 0.761
ENSNLEG00000007387 Nomascus leucogenys ENSNLEG00000007387 I 0.761
HINFP Oryctolagus cuniculus ENSOCUG00000010808 N 0.763
HINFP Otolemur garnettii ENSOGAG00000007304 I 0.800
ENSP00000318085 Macaca fascicularis ENSP00000318085 I 0.761
ENSPANG00000005040 Papio anubis ENSPANG00000005040 I 0.761
HINFP Procavia capensis ENSPCAG00000013133 I 0.806
ENSPPYG00000003957 Pongo abelii ENSPPYG00000003957 I 0.761
HINFP Pan troglodytes ENSPTRG00000004372 I 0.761
HINFP Pteropus vampyrus ENSPVAG00000005598 I 0.796
ENSSHAG00000009681 Sarcophilus harrisii ENSSHAG00000009681 I 0.825
HINFP Sus scrofa ENSSSCG00000015112 I 0.765
ENSSTOG00000014457 Ictidomys tridecemlineatus ENSSTOG00000014457 I 0.806
ENSTSYG00000012226 Tarsius syrichta ENSTSYG00000012226 I 0.790
HINFP Tursiops truncatus ENSTTRG00000002809 I 0.762
Myotis_brandtii_HINFP_10033522 Myotis brandtii Myotis_brandtii_HINFP_10033522 I 0.796