Afo_R000623 (Aptenodytes forsteri)
C2H2 ZF

TF Information

Pfam ID Interpro ID Gene ID CIS-BP ID Sequence source
PF00096 (zf-C2H2) IPR007087 Afo_R000623 T132737_2.00 GigaDB (2015-Oct-22)

Directly determined binding motifs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score
DBD
Identity
No direct experiments

Motifs from related TFs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score
DBD
Identity
ZBTB49
M02901_2.00
Homo sapiens
TTYYGCYTGRCVBGTCA

TGACVBGYCARGCRRAA
SELEX
Jolma et al.(2013)
ZBTB49_1
0.819 0.975
For this family, TFs with SR scores > 0.755 will likely have a similar motif

DNA Binding Domains

Protein ID Domain From To Sequence
Afo_R000623 C2H2 ZF 396 418
Afo_R000623 C2H2 ZF 424 446
Afo_R000623 C2H2 ZF 452 474
Afo_R000623 C2H2 ZF 480 502
Afo_R000623 C2H2 ZF 508 530
Afo_R000623 C2H2 ZF 536 558
Afo_R000623 C2H2 ZF 564 586

Links

Other C2H2 ZF family TFs
Other Aptenodytes forsteri TFs

Invalid Input OrderBy

45 Related TFs

Name Species Gene ID Motif Evidence SR
Score
Action