Afo_R001041 (Aptenodytes forsteri)
C2H2 ZF

TF Information

Pfam ID Interpro ID Gene ID CIS-BP ID Sequence source
PF00096 (zf-C2H2) IPR007087 Afo_R001041 T132742_2.00 GigaDB (2015-Oct-22)

Directly determined binding motifs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score		 DBD
Identity
No direct experiments

Motifs from related TFs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score		 DBD
Identity
GLIS3
M02880_2.00 		Homo sapiens
CTTYGTGGGGGGTM
KACCCCCCACRAAG		 SELEX
Jolma et al.(2013)
GLIS3_1 		0.769 0.930
GLIS3
M10169_2.00 		Homo sapiens Transfac license required
 Transfac license required
 Transfac
Matys et al.(2006)
V$ZNF515_01 		0.769 0.930
GLIS3
M10170_2.00 		Homo sapiens Transfac license required
 Transfac license required
 Transfac
Matys et al.(2006)
V$ZNF515_Q6_01 		0.769 0.930
GLIS3
M10171_2.00 		Homo sapiens Transfac license required
 Transfac license required
 Transfac
Matys et al.(2006)
V$ZNF515_Q6 		0.769 0.930
For this family, TFs with SR scores > 0.755 will likely have a similar motif

DNA Binding Domains

Protein ID Domain From To Sequence
Afo_R001041 C2H2 ZF 317 342
Afo_R001041 C2H2 ZF 351 378
Afo_R001041 C2H2 ZF 385 408
Afo_R001041 C2H2 ZF 414 438
Afo_R001041 C2H2 ZF 444 468

Links

Other C2H2 ZF family TFs
Other Aptenodytes forsteri TFs

Invalid Input OrderBy

68 Related TFs

Name Species Gene ID Motif Evidence SR
Score		 Action