CIS-BP Database: Catalog of Inferred Sequence Binding Preferences
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Afo_R003306
(
Aptenodytes forsteri
)
C2H2 ZF
TF Information
Pfam ID
Interpro ID
Gene ID
CIS-BP ID
Sequence source
PF00096 (zf-C2H2)
IPR007087
Afo_R003306
T132770_2.00
GigaDB (2015-Oct-22)
Directly determined binding motifs
Name/Motif ID
Species
Forward
Reverse
Type/Study/Study ID
SR
Score
DBD
Identity
No direct experiments
Motifs from related TFs
Name/Motif ID
Species
Forward
Reverse
Type/Study/Study ID
SR
Score
DBD
Identity
PRDM16
M10223_2.00
Homo sapiens
Transfac license required
Transfac license required
Transfac
Matys et al.(2006)
V$PRDM16_03
0.825
0.987
PRDM16
M10224_2.00
Homo sapiens
Transfac license required
Transfac license required
Transfac
Matys et al.(2006)
V$PRDM16_04
0.825
0.987
PRDM16
M10225_2.00
Homo sapiens
Transfac license required
Transfac license required
Transfac
Matys et al.(2006)
V$PRDM16_05
0.825
0.987
For this family, TFs with SR scores >
0.755
will likely have a similar motif
DNA Binding Domains
Protein ID
Domain
From
To
Sequence
Afo_R003306
C2H2 ZF
5
26
FRCEDCDELFQSKLDLRRHKKY
Afo_R003306
C2H2 ZF
53
75
YECKDCERMFPNKYSLEQHMVIH
Afo_R003306
C2H2 ZF
81
103
YKCDQCPKAFNWKSNLIRHQMSH
Afo_R003306
C2H2 ZF
109
132
FECENCVKVFTDPSNLQRHIRSQH
Afo_R003306
C2H2 ZF
138
160
HACPDCGKTFATSSGLKQHKHIH
Afo_R003306
C2H2 ZF
166
188
FICEVCHKSYTQFSNLCRHKRMH
Afo_R003306
C2H2 ZF
195
216
IKCKDCGQMFSTTSSLNKHRRF
Afo_R003306
C2H2 ZF
717
739
YTCRYCGKIFPRSANLTRHLRTH
Afo_R003306
C2H2 ZF
745
768
YRCKYCDRSFSISSNLQRHVRNIH
Afo_R003306
C2H2 ZF
774
796
FKCHLCNRCFGQQTNLDRHLKKH
Links
Other
C2H2 ZF
family TFs
Other
Aptenodytes forsteri
TFs
34 Related TFs
Name
Species
Gene ID
Motif Evidence
SR
Score
Action
Invalid Input OrderBy