CIS-BP Database: Catalog of Inferred Sequence Binding Preferences
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Afo_R003947
(
Aptenodytes forsteri
)
C2H2 ZF
TF Information
Pfam ID
Interpro ID
Gene ID
CIS-BP ID
Sequence source
PF00096 (zf-C2H2)
IPR007087
Afo_R003947
T132780_2.00
GigaDB (2015-Oct-22)
Directly determined binding motifs
Name/Motif ID
Species
Forward
Reverse
Type/Study/Study ID
SR
Score
DBD
Identity
No direct experiments
Motifs from related TFs
Name/Motif ID
Species
Forward
Reverse
Type/Study/Study ID
SR
Score
DBD
Identity
MYNN
M08283_2.00
Homo sapiens
GRCTYTTAWTTT
AAAWTAARAGYC
ChIP-seq
Schmitges et al.(2016)
Q9NPC7_1-4.RCADE
0.817
0.973
For this family, TFs with SR scores >
0.755
will likely have a similar motif
DNA Binding Domains
Protein ID
Domain
From
To
Sequence
Afo_R003947
C2H2 ZF
305
326
VCNTCGKVFSEASSLRRHMRIH
Afo_R003947
C2H2 ZF
332
354
YVCQLCGKAFTQCNQLKTHVRTH
Afo_R003947
C2H2 ZF
360
383
YKCELCDKGFAQKCQLVFHSRMHH
Afo_R003947
C2H2 ZF
389
411
YKCDVCNLQFATSSNLKIHARKH
Afo_R003947
C2H2 ZF
417
439
YVCDRCGQRFAQASTLTYHVRRH
Afo_R003947
C2H2 ZF
445
467
YVCDSCGKAFAVSSSLITHSRKH
Afo_R003947
C2H2 ZF
473
495
YICGICEKSFISSGELNKHFRSH
Afo_R003947
C2H2 ZF
501
524
FICEMCGNSYTDIKNLKKHKTKVH
Links
Other
C2H2 ZF
family TFs
Other
Aptenodytes forsteri
TFs
46 Related TFs
Name
Species
Gene ID
Motif Evidence
SR
Score
Action
Invalid Input OrderBy