CIS-BP Database: Catalog of Inferred Sequence Binding Preferences
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Afo_R007523
(
Aptenodytes forsteri
)
C2H2 ZF
TF Information
Pfam ID
Interpro ID
Gene ID
CIS-BP ID
Sequence source
PF00096 (zf-C2H2)
IPR007087
Afo_R007523
T132828_2.00
GigaDB (2015-Oct-22)
Directly determined binding motifs
Name/Motif ID
Species
Forward
Reverse
Type/Study/Study ID
SR
Score
DBD
Identity
No direct experiments
Motifs from related TFs
Name/Motif ID
Species
Forward
Reverse
Type/Study/Study ID
SR
Score
DBD
Identity
ZNF276
M04495_2.00
Homo sapiens
NWAAGGWSGWVDMKACNHCCTTWAN
NTWAAGGDNGTMKHBWCSWCCTTWN
SELEX
Yin et al.(2017)
ZNF276_eDBD_HT-SELEX
0.816
0.974
ZNF276
M04496_2.00
Homo sapiens
STTAAGGBSGWVWATACYHCCTTAMN
NKTAAGGDRGTATWBWCSVCCTTAAS
SELEX
Yin et al.(2017)
ZNF276_eDBD_Methyl-HT-SELEX
0.816
0.974
For this family, TFs with SR scores >
0.755
will likely have a similar motif
DNA Binding Domains
Protein ID
Domain
From
To
Sequence
Afo_R007523
C2H2 ZF
357
382
YKCPYQGCTAVYRGADGMKKHIKEHH
Afo_R007523
C2H2 ZF
389
413
PCPHPGCNKVFMIDRYLQRHVKLIH
Afo_R007523
C2H2 ZF
419
441
YICDECGQTFKQRKHLSVHQMRH
Afo_R007523
C2H2 ZF
447
469
LQCEICGFQCRQRASLKYHMTKH
Afo_R007523
C2H2 ZF
477
500
FACDQCGKRFEKAHNLNVHMSMVH
Links
Other
C2H2 ZF
family TFs
Other
Aptenodytes forsteri
TFs
67 Related TFs
Name
Species
Gene ID
Motif Evidence
SR
Score
Action
Invalid Input OrderBy