CIS-BP Database: Catalog of Inferred Sequence Binding Preferences
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Afo_R012427
(
Aptenodytes forsteri
)
C2H2 ZF
TF Information
Pfam ID
Interpro ID
Gene ID
CIS-BP ID
Sequence source
PF00096 (zf-C2H2)
IPR007087
Afo_R012427
T132898_2.00
GigaDB (2015-Oct-22)
Directly determined binding motifs
Name/Motif ID
Species
Forward
Reverse
Type/Study/Study ID
SR
Score
DBD
Identity
No direct experiments
Motifs from related TFs
Name/Motif ID
Species
Forward
Reverse
Type/Study/Study ID
SR
Score
DBD
Identity
No TFs with similar DNA binding domains
DNA Binding Domains
Protein ID
Domain
From
To
Sequence
Afo_R012427
C2H2 ZF
141
163
YVCELCQKTFKTASILKAHMITH
Afo_R012427
C2H2 ZF
169
191
YECKLCGTSFRTKGSLIRHHRRH
Afo_R012427
C2H2 ZF
197
218
YKCKKCGKSFRESGALTRHLKS
Afo_R012427
C2H2 ZF
387
409
YVCPHCNEAFSEAASLETHIKGH
Afo_R012427
C2H2 ZF
415
437
FKCEECGKEFTKGYLLKKHQEVH
Afo_R012427
C2H2 ZF
443
465
FRCGECGKLYKTIAHVKGHRRVH
Afo_R012427
C2H2 ZF
471
493
YSCPKCGKRYKTKNAQQVHFRTH
Afo_R012427
C2H2 ZF
499
521
YVCQYCSRGFREKGSLVRHIRHH
Afo_R012427
C2H2 ZF
527
548
FKCYKCGRGFAEHGTLNRHLKT
Links
Other
C2H2 ZF
family TFs
Other
Aptenodytes forsteri
TFs
10 Related TFs
Name
Species
Gene ID
Motif Evidence
SR
Score
Action
E4F1
Gallus gallus
ENSGALG00000005900
N
0.827
E4F1
Meleagris gallopavo
ENSMGAG00000006207
N
0.822
Tal_R010941
Tyto alba
Tal_R010941
N
0.819
Aan_R014257
Calypte anna
Aan_R014257
N
0.804
ENSAPLG00000005530
Anas platyrhynchos
ENSAPLG00000005530
N
0.800
Alligator_sinensis_CCG001761.1
Alligator sinensis
Alligator_sinensis_CCG001761.1
N
0.794
ENSFALG00000003632
Ficedula albicollis
ENSFALG00000003632
N
0.787
Gfo_R006343
Geospiza fortis
Gfo_R006343
N
0.779
Cmyd_10010492
Chelonia mydas
Cmyd_10010492
N
0.772
Ogr10212
Ophisaurus gracilis
Ogr10212
N
0.757