CIS-BP Database: Catalog of Inferred Sequence Binding Preferences
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Alligator_sinensis_CCG001089.1
(
Alligator sinensis
)
C2H2 ZF
TF Information
Pfam ID
Interpro ID
Gene ID
CIS-BP ID
Sequence source
PF00096 (zf-C2H2)
IPR007087
Alligator_sinensis_CCG001089.1
T132961_2.00
GigaDB (2015-Oct-22)
Directly determined binding motifs
Name/Motif ID
Species
Forward
Reverse
Type/Study/Study ID
SR
Score
DBD
Identity
No direct experiments
Motifs from related TFs
Name/Motif ID
Species
Forward
Reverse
Type/Study/Study ID
SR
Score
DBD
Identity
No TFs with similar DNA binding domains
DNA Binding Domains
Protein ID
Domain
From
To
Sequence
Alligator_sinensis_CCG001089.1
C2H2 ZF
610
632
WECVDCGRTFQFRSKLSAHQSVH
Alligator_sinensis_CCG001089.1
C2H2 ZF
638
660
HACPDCGKSFRLRHYLTLHQRIH
Alligator_sinensis_CCG001089.1
C2H2 ZF
666
688
YTCPECKKSFRLRYDLTRHQSVH
Alligator_sinensis_CCG001089.1
C2H2 ZF
694
716
HVCPDCGRNFRLRQELTEHQSIH
Alligator_sinensis_CCG001089.1
C2H2 ZF
722
744
FLCRVCGESFRLKRMLIQHEGIH
Alligator_sinensis_CCG001089.1
C2H2 ZF
750
772
FTCPKCKKCFRLRQDLNKHQIVH
Alligator_sinensis_CCG001089.1
C2H2 ZF
778
800
YLCADCGKSFSQRNSLIKHQSIH
Alligator_sinensis_CCG001089.1
C2H2 ZF
934
956
HMCPDCGKSFQRRSSLFQHHTIH
Alligator_sinensis_CCG001089.1
C2H2 ZF
962
983
YVCPDCGKSFRLKCSLIHHQRL
Alligator_sinensis_CCG001089.1
C2H2 ZF
1018
1040
HVCPDCGRRFRRRGNLIEHQSIH
Alligator_sinensis_CCG001089.1
C2H2 ZF
1046
1068
YACPDCSKSFRRKRNLIQHHSIH
Alligator_sinensis_CCG001089.1
C2H2 ZF
1074
1095
FACPDCGRSFRLRCSLIHHQRL
Alligator_sinensis_CCG001089.1
C2H2 ZF
1129
1151
YVCPDCGRSFIHKKRLTQHQSIH
Alligator_sinensis_CCG001089.1
C2H2 ZF
1285
1307
YMCPDCEKSFRRRSNLIEHQSIH
Alligator_sinensis_CCG001089.1
C2H2 ZF
1313
1335
YACPDCGKSFRRKRNLFEHHSIH
Alligator_sinensis_CCG001089.1
C2H2 ZF
1341
1362
FVCADCGKSFRLRCSLIHHQRL
Alligator_sinensis_CCG001089.1
C2H2 ZF
1397
1419
YTCPDWGRSFMHKEKLIQHQNIH
Alligator_sinensis_CCG001089.1
C2H2 ZF
1778
1800
YDCLDCGKSFITSSDLLQHHILH
Alligator_sinensis_CCG001089.1
C2H2 ZF
1806
1828
YTCLDCGKSFTRKYGLTEHQSIH
Alligator_sinensis_CCG001089.1
C2H2 ZF
1834
1856
YTCPDCGKSFRRKNGLVEHQRIH
Alligator_sinensis_CCG001089.1
C2H2 ZF
1862
1884
YMCPACGKNFGLRHSLIKHQRIH
Alligator_sinensis_CCG001089.1
C2H2 ZF
1890
1912
YACHDCGKSFRQKNRLTEHQRLH
Alligator_sinensis_CCG001089.1
C2H2 ZF
1918
1940
YSCPDCGKSFRLGHELTKHQRCH
Alligator_sinensis_CCG001089.1
C2H2 ZF
1946
1968
YMCSDCGKRFRYRDGFAKHRRLH
Alligator_sinensis_CCG001089.1
C2H2 ZF
1974
1996
YSCADCGEKFHLGRSLKQHQSIH
Alligator_sinensis_CCG001089.1
C2H2 ZF
2090
2112
FECADCGRRFQRRSKLSVHQRVH
Alligator_sinensis_CCG001089.1
C2H2 ZF
2118
2140
YKCLDCEKSFITSSDLLQHQILH
Alligator_sinensis_CCG001089.1
C2H2 ZF
2146
2168
YICLDCGKCFTRKYGLTEHQSIH
Alligator_sinensis_CCG001089.1
C2H2 ZF
2174
2196
YVCPNCGKSFRRKNGLIQHERIH
Alligator_sinensis_CCG001089.1
C2H2 ZF
2202
2224
YSCPECGRRFRLGHELTKHQRHH
Alligator_sinensis_CCG001089.1
C2H2 ZF
2230
2252
YMCSDCGKRFRYQESLTKHRRFH
Alligator_sinensis_CCG001089.1
C2H2 ZF
2258
2280
YVCSDCGKCFRYQESLTKHWRLH
Alligator_sinensis_CCG001089.1
C2H2 ZF
2286
2308
YMCSDCGKCFRYQESLTKHWRLH
Alligator_sinensis_CCG001089.1
C2H2 ZF
2314
2336
YLCSDCGKCFKYQGSLTKHRKLH
Alligator_sinensis_CCG001089.1
C2H2 ZF
2342
2364
YTCPDCGESFRLGHFLKQHRSIH
Links
Other
C2H2 ZF
family TFs
Other
Alligator sinensis
TFs
0 Related TFs
">No related TF found