Alligator_sinensis_CCG001391.4 (Alligator sinensis)
C2H2 ZF

TF Information

Pfam ID Interpro ID Gene ID CIS-BP ID Sequence source
PF00096 (zf-C2H2) IPR007087 Alligator_sinensis_CCG001391.4 T132974_2.00 GigaDB (2015-Oct-22)

Directly determined binding motifs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score		 DBD
Identity
No direct experiments

Motifs from related TFs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score		 DBD
Identity
Maz
M08988_2.00 		Mus musculus
YYBYYYYYYCNSYYCCWCCYYN
NRRGGWGGRRSNGRRRRRRVRR		 Misc
Kulakovskiy et al.(2013)
MAZ_MOUSE.H11MO.0.A 		0.782 0.964
For this family, TFs with SR scores > 0.755 will likely have a similar motif

DNA Binding Domains

Protein ID Domain From To Sequence
Alligator_sinensis_CCG001391.4 C2H2 ZF 1 19
Alligator_sinensis_CCG001391.4 C2H2 ZF 25 47
Alligator_sinensis_CCG001391.4 C2H2 ZF 55 78
Alligator_sinensis_CCG001391.4 C2H2 ZF 84 106
Alligator_sinensis_CCG001391.4 C2H2 ZF 110 131

Links

Other C2H2 ZF family TFs
Other Alligator sinensis TFs

Invalid Input OrderBy

24 Related TFs

Name Species Gene ID Motif Evidence SR
Score		 Action