Alligator_sinensis_CCG001512.1 (Alligator sinensis)
C2H2 ZF

TF Information

Pfam ID Interpro ID Gene ID CIS-BP ID Sequence source
PF00096 (zf-C2H2) IPR007087 Alligator_sinensis_CCG001512.1 T132977_2.00 GigaDB (2015-Oct-22)

Directly determined binding motifs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score
DBD
Identity
No direct experiments

Motifs from related TFs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score
DBD
Identity
No TFs with similar DNA binding domains

DNA Binding Domains

Protein ID Domain From To Sequence
Alligator_sinensis_CCG001512.1 C2H2 ZF 403 430
Alligator_sinensis_CCG001512.1 C2H2 ZF 436 460
Alligator_sinensis_CCG001512.1 C2H2 ZF 466 491
Alligator_sinensis_CCG001512.1 C2H2 ZF 497 522

Links

Other C2H2 ZF family TFs
Other Alligator sinensis TFs

23 Related TFs

Name Species Gene ID Motif Evidence SR
Score
Action
ACEP11153 Atta cephalotes ACEP11153 N 0.798
ENSP00000379255-D1 Bos grunniens ENSP00000379255-D1 N 0.827
Myotis_brandtii_GLI3_10009944 Myotis brandtii Myotis_brandtii_GLI3_10009944 N 0.827
Ogr17074 Ophisaurus gracilis Ogr17074 N 0.827
SMU15013615 Schmidtea mediterranea SMU15013615 N 0.772
gli2 Xenopus tropicalis XB-GENE-481810 N 0.815
XP_002156924.1 Hydra magnipapillata XP_002156924.1 N 0.765
SMRZ_0000087601 Schistosoma margrebowiei SMRZ_0000087601 N 0.792
SMTD_0001685401 Schistosoma mattheei SMTD_0001685401 N 0.795
SROB_0000648801 Schistosoma rodhaini SROB_0000648801 N 0.795
Cflo_10733--XP_624136.2_APIME Camponotus floridanus Cflo_10733--XP_624136.2_APIME N 0.810
Brh_R006636 Buceros rhinoceros Brh_R006636 N 0.821
Alligator_sinensis_CCG009321.1 Alligator sinensis Alligator_sinensis_CCG009321.1 N 0.821
ACYPI45156 Acyrthosiphon pisum ACYPI45156 N 0.798
Aqu1.217717 Amphimedon queenslandica Aqu1.217717 N 0.762
ENSMICG00000005378 Microcebus murinus ENSMICG00000005378 N 0.779
gli2b Oryzias latipes ENSORLG00000001328 N 0.813
ENSORLG00000015277 Oryzias latipes ENSORLG00000015277 N 0.812
ENSPMAG00000007806 Petromyzon marinus ENSPMAG00000007806 N 0.822
GLI2 Tupaia belangeri ENSTBEG00000008264 N 0.795
ENSTGUG00000014304 Taeniopygia guttata ENSTGUG00000014304 N 0.827
Aan_R000709 Calypte anna Aan_R000709 N 0.821
TMUE_s0120001200 Trichuris muris TMUE_s0120001200 N 0.780