Alligator_sinensis_CCG001947.1 (Alligator sinensis)
C2H2 ZF

TF Information

Pfam ID Interpro ID Gene ID CIS-BP ID Sequence source
PF00096 (zf-C2H2) IPR007087 Alligator_sinensis_CCG001947.1 T132994_2.00 GigaDB (2015-Oct-22)

Directly determined binding motifs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score		 DBD
Identity
No direct experiments

Motifs from related TFs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score		 DBD
Identity
ZBTB2
M04595_2.00 		Homo sapiens
NNTYCCGGTWMH
DKWACCGGRANN		 SELEX
Yin et al.(2017)
ZBTB2_eDBD_HT-SELEX 		0.824 0.985
ZBTB2
M10284_2.00 		Homo sapiens Transfac license required
 Transfac license required
 Transfac
Matys et al.(2006)
V$ZBTB2_Q3_01 		0.824 0.985
ZBTB2
M10285_2.00 		Homo sapiens Transfac license required
 Transfac license required
 Transfac
Matys et al.(2006)
V$ZBTB2_Q3 		0.824 0.985
ZBTB2
M04596_2.00 		Homo sapiens
GTTTCCGGTAMY
RKTACCGGAAAC		 SELEX
Yin et al.(2017)
ZBTB2_eDBD_Methyl-HT-SELEX 		0.824 0.985
For this family, TFs with SR scores > 0.755 will likely have a similar motif

DNA Binding Domains

Protein ID Domain From To Sequence
Alligator_sinensis_CCG001947.1 C2H2 ZF 358 380
Alligator_sinensis_CCG001947.1 C2H2 ZF 385 406
Alligator_sinensis_CCG001947.1 C2H2 ZF 443 463

Links

Other C2H2 ZF family TFs
Other Alligator sinensis TFs

Invalid Input OrderBy

62 Related TFs

Name Species Gene ID Motif Evidence SR
Score		 Action