Alligator_sinensis_CCG003669.1 (Alligator sinensis)
C2H2 ZF

TF Information

Pfam ID Interpro ID Gene ID CIS-BP ID Sequence source
PF00096 (zf-C2H2) IPR007087 Alligator_sinensis_CCG003669.1 T133030_2.00 GigaDB (2015-Oct-22)

Directly determined binding motifs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score		 DBD
Identity
No direct experiments

Motifs from related TFs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score		 DBD
Identity
cbt
M03705_2.00 		Drosophila melanogaster
DMCACRCCCMY
RKGGGYGTGKH		 SELEX
Nitta et al.(2015)
cbt_1 		0.763 0.710
cbt
M03706_2.00 		Drosophila melanogaster
RMCRCGCCCMCHH
DDGKGGGCGYGKY		 SELEX
Nitta et al.(2015)
cbt_2 		0.763 0.710
KLF15
M04511_2.00 		Homo sapiens
VHCMCVCCCMYN
NRKGGGBGKGDB		 SELEX
Yin et al.(2017)
KLF15_eDBD_HT-SELEX 		0.757 0.768
KLF15
M04513_2.00 		Homo sapiens
VMCMCDCCCMCH
DGKGGGHGKGKB		 SELEX
Yin et al.(2017)
KLF15_FL_HT-SELEX 		0.757 0.768
KLF15
M08323_2.00 		Homo sapiens
SSCYNBCYCCDCCYC
GRGGHGGRGVNRGSS		 ChIP-seq
Schmitges et al.(2016)
Q9UIH9.MEME 		0.757 0.768
KLF15
M08907_2.00 		Homo sapiens
CCNYYCCYNBCYCCKCCYY
RRGGMGGRGVNRGGRRNGG		 Misc
Kulakovskiy et al.(2013)
KLF15_HUMAN.H11MO.0.A 		0.757 0.768
Klf15
M08987_2.00 		Mus musculus
CCNYYCCYNBCYCCKCCYY
RRGGMGGRGVNRGGRRNGG		 Misc
Kulakovskiy et al.(2013)
KLF15_MOUSE.H11MO.0.A 		0.757 0.768
KLF15
M10241_2.00 		Homo sapiens Transfac license required
 Transfac license required
 Transfac
Matys et al.(2006)
V$KLF15_Q2 		0.757 0.768
KLF15
M04512_2.00 		Homo sapiens
RCCMCGCCCMCH
DGKGGGCGKGGY		 SELEX
Yin et al.(2017)
KLF15_eDBD_Methyl-HT-SELEX 		0.757 0.768
KLF15
M04514_2.00 		Homo sapiens
GCCMCGCCCMCN
NGKGGGCGKGGC		 SELEX
Yin et al.(2017)
KLF15_FL_Methyl-HT-SELEX 		0.757 0.768
For this family, TFs with SR scores > 0.755 will likely have a similar motif

DNA Binding Domains

Protein ID Domain From To Sequence
Alligator_sinensis_CCG003669.1 C2H2 ZF 280 304
Alligator_sinensis_CCG003669.1 C2H2 ZF 310 334
Alligator_sinensis_CCG003669.1 C2H2 ZF 340 362

Links

Other C2H2 ZF family TFs
Other Alligator sinensis TFs

86 Related TFs

Name Species Gene ID Motif Evidence SR
Score		 Action
Tal_R006156 Tyto alba Tal_R006156 I 0.780
ENSACAG00000012356 Anolis carolinensis ENSACAG00000012356 I 0.780
CLEC005479 Cimex lectularius CLEC005479 N 0.776
ENSGALG00000021702 Gallus gallus ENSGALG00000021702 I 0.774
ENSMGAG00000003006 Meleagris gallopavo ENSMGAG00000003006 I 0.774
ENSFALG00000000608 Ficedula albicollis ENSFALG00000000608 N 0.771
Cmyd_10010595 Chelonia mydas Cmyd_10010595 I 0.768
L798_11927 Zootermopsis nevadensis L798_11927 I 0.767
klf15.2 Xenopus tropicalis XB-GENE-1018580 I 0.767
Ogr18174 Ophisaurus gracilis Ogr18174 I 0.764
Pvit_06090 Pogona vitticeps Pvit_06090 I 0.764
cbt Drosophila sechellia FBgn0171577 I 0.763
cbt Drosophila virilis FBgn0206865 I 0.763
cbt Drosophila yakuba FBgn0233632 I 0.763
cbt Drosophila mojavensis FBgn0140770 I 0.763
cbt Drosophila simulans FBgn0194348 I 0.763
cbt Drosophila ananassae FBgn0101744 I 0.763
cbt Drosophila erecta FBgn0116778 I 0.763
cbt Drosophila melanogaster FBgn0043364 D 0.763
KLF15 Meleagris gallopavo ENSMGAG00000007616 I 0.761
klf15 Takifugu rubripes ENSTRUG00000014976 I 0.761
ENSPFOG00000012815 Poecilia formosa ENSPFOG00000012815 I 0.761
ENSXMAG00000007908 Xiphophorus maculatus ENSXMAG00000007908 I 0.761
klf15 Oryzias latipes ENSORLG00000001165 I 0.761
ENSONIG00000003215 Oreochromis niloticus ENSONIG00000003215 I 0.761
ENSONIG00000009164 Oreochromis niloticus ENSONIG00000009164 I 0.761
Afo_R011755 Aptenodytes forsteri Afo_R011755 I 0.761
Gfo_R014652 Geospiza fortis Gfo_R014652 I 0.761
Cmyd_10013831 Chelonia mydas Cmyd_10013831 I 0.761
Pvit_11468 Pogona vitticeps Pvit_11468 I 0.761
Tal_R002960 Tyto alba Tal_R002960 I 0.761
ENSAPLG00000012971 Anas platyrhynchos ENSAPLG00000012971 I 0.761
klf15 Gasterosteus aculeatus ENSGACG00000003717 I 0.761
ENSFALG00000012601 Ficedula albicollis ENSFALG00000012601 I 0.761
ENSGALG00000006245 Gallus gallus ENSGALG00000006245 I 0.761
Aan_R004458 Calypte anna Aan_R004458 I 0.761
Brh_R002160 Buceros rhinoceros Brh_R002160 I 0.761
Alligator_sinensis_CCG019865.1 Alligator sinensis Alligator_sinensis_CCG019865.1 I 0.761
cbt Drosophila willistoni FBgn0226609 I 0.760
ENSXMAG00000001323 Xiphophorus maculatus ENSXMAG00000001323 I 0.757
KLF15 Tursiops truncatus ENSTTRG00000008498 I 0.757
klf15.S Xenopus laevis XB-GENE-854150 I 0.757
klf15 Xenopus tropicalis XB-GENE-854149 I 0.757
NEMVEDRAFT_v1g82548 Nematostella vectensis NEMVEDRAFT_v1g82548 I 0.757
ENSP00000296233 Macaca fascicularis ENSP00000296233 I 0.757
KLF15 Takifugu rubripes ENSTRUG00000006529 I 0.757
Ogr01993 Ophisaurus gracilis Ogr01993 I 0.757
ENSPFOG00000003698 Poecilia formosa ENSPFOG00000003698 I 0.757
KLF15 Equus caballus ENSECAG00000021092 I 0.757
ENSDORG00000016283 Dipodomys ordii ENSDORG00000016283 I 0.757
KLF15 Dasypus novemcinctus ENSDNOG00000036157 I 0.757
KLF15 Homo sapiens ENSG00000163884 D 0.757
KLF15 Gasterosteus aculeatus ENSGACG00000011317 I 0.757
ENSLACG00000013240 Latimeria chalumnae ENSLACG00000013240 I 0.757
ENSLACG00000009512 Latimeria chalumnae ENSLACG00000009512 I 0.757
ENSGMOG00000000921 Gadus morhua ENSGMOG00000000921 I 0.757
klf15 Danio rerio ENSDARG00000091127 I 0.757
ENSCSAG00000008037 Chlorocebus sabaeus ENSCSAG00000008037 I 0.757
ENSAMXG00000016240 Astyanax mexicanus ENSAMXG00000016240 I 0.757
ENSAMXG00000012874 Astyanax mexicanus ENSAMXG00000012874 I 0.757
ENSAMEG00000006403 Ailuropoda melanoleuca ENSAMEG00000006403 I 0.757
KLF15 Bos taurus ENSBTAG00000008313 I 0.757
KLF15 Canis familiaris ENSCAFG00000003807 I 0.757
KLF15 Cavia porcellus ENSCPOG00000005315 I 0.757
KLF15 Callithrix jacchus ENSCJAG00000006941 I 0.757
ENSSHAG00000007635 Sarcophilus harrisii ENSSHAG00000007635 I 0.757
KLF15 Loxodonta africana ENSLAFG00000011970 I 0.757
ENSPANG00000026096 Papio anubis ENSPANG00000026096 I 0.757
KLF15 Ochotona princeps ENSOPRG00000005237 I 0.757
KLF15 Otolemur garnettii ENSOGAG00000000703 I 0.757
KLF15 Procavia capensis ENSPCAG00000006301 I 0.757
ENSPPYG00000013455 Pongo abelii ENSPPYG00000013455 I 0.757
Klf15 Rattus norvegicus ENSRNOG00000017808 I 0.757
KLF15 Pteropus vampyrus ENSPVAG00000004109 I 0.757
ENSNLEG00000001047 Nomascus leucogenys ENSNLEG00000001047 I 0.757
KLF15 Ornithorhynchus anatinus ENSOANG00000014825 I 0.757
ENSLOCG00000013716 Lepisosteus oculatus ENSLOCG00000013716 I 0.757
ENSLOCG00000011807 Lepisosteus oculatus ENSLOCG00000011807 I 0.757
KLF15 Macaca mulatta ENSMMUG00000003721 I 0.757
KLF15 Myotis lucifugus ENSMLUG00000010178 I 0.757
ENSMPUG00000017390 Mustela putorius furo ENSMPUG00000017390 I 0.757
Klf15 Mus musculus ENSMUSG00000030087 D 0.757
LotgiG100140 Lottia gigantea LotgiG100140 I 0.756
LDEC016289 Leptinotarsa decemlineata LDEC016289 I 0.756
HHAL008603-PA Halyomorpha halys HHAL008603-PA N 0.756
YQE_06283 Dendroctonus ponderosae YQE_06283 I 0.756