CIS-BP Database: Catalog of Inferred Sequence Binding Preferences
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Alligator_sinensis_CCG004348.1
(
Alligator sinensis
)
C2H2 ZF
TF Information
Pfam ID
Interpro ID
Gene ID
CIS-BP ID
Sequence source
PF00096 (zf-C2H2)
IPR007087
Alligator_sinensis_CCG004348.1
T133063_2.00
GigaDB (2015-Oct-22)
Directly determined binding motifs
Name/Motif ID
Species
Forward
Reverse
Type/Study/Study ID
SR
Score
DBD
Identity
No direct experiments
Motifs from related TFs
Name/Motif ID
Species
Forward
Reverse
Type/Study/Study ID
SR
Score
DBD
Identity
No TFs with similar DNA binding domains
DNA Binding Domains
Protein ID
Domain
From
To
Sequence
Alligator_sinensis_CCG004348.1
C2H2 ZF
153
175
TICEECGRSFSRTSNLIVHQRLH
Alligator_sinensis_CCG004348.1
C2H2 ZF
181
203
YKCLDCGKTFSRSSHLITHQRLH
Alligator_sinensis_CCG004348.1
C2H2 ZF
209
231
YKCSDCGKSFSDSSTLITHQRLH
Alligator_sinensis_CCG004348.1
C2H2 ZF
237
259
YKCPDCGKGFNQSSNLTSHQRTH
Alligator_sinensis_CCG004348.1
C2H2 ZF
265
287
YKCPECGKSFSVSSYLIRHQKIH
Alligator_sinensis_CCG004348.1
C2H2 ZF
293
315
YKCEECEKSFSQSSSLINHQRVH
Alligator_sinensis_CCG004348.1
C2H2 ZF
321
343
YKCIDCNKWFRNSSDLIRHQRTH
Alligator_sinensis_CCG004348.1
C2H2 ZF
349
371
YRCPDCGKSFNRNSNLMTHQRTH
Alligator_sinensis_CCG004348.1
C2H2 ZF
377
399
YECPVCGRSFTVSSALIKHQRTH
Alligator_sinensis_CCG004348.1
C2H2 ZF
405
427
YKCPDCGKSFIRCSNFITHRRIH
Links
Other
C2H2 ZF
family TFs
Other
Alligator sinensis
TFs
1 Related TFs
Name
Species
Gene ID
Motif Evidence
SR
Score
Action
Cmyd_10001280
Chelonia mydas
Cmyd_10001280
N
0.800