Alligator_sinensis_CCG004396.1 (Alligator sinensis)
C2H2 ZF

TF Information

Pfam ID Interpro ID Gene ID CIS-BP ID Sequence source
PF00096 (zf-C2H2) IPR007087 Alligator_sinensis_CCG004396.1 T133073_2.00 GigaDB (2015-Oct-22)

Directly determined binding motifs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score		 DBD
Identity
No direct experiments

Motifs from related TFs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score		 DBD
Identity
No TFs with similar DNA binding domains

DNA Binding Domains

Protein ID Domain From To Sequence
Alligator_sinensis_CCG004396.1 C2H2 ZF 359 381
Alligator_sinensis_CCG004396.1 C2H2 ZF 387 409
Alligator_sinensis_CCG004396.1 C2H2 ZF 442 461
Alligator_sinensis_CCG004396.1 C2H2 ZF 467 490
Alligator_sinensis_CCG004396.1 C2H2 ZF 494 514
Alligator_sinensis_CCG004396.1 C2H2 ZF 523 545
Alligator_sinensis_CCG004396.1 C2H2 ZF 551 574
Alligator_sinensis_CCG004396.1 C2H2 ZF 579 601
Alligator_sinensis_CCG004396.1 C2H2 ZF 607 630
Alligator_sinensis_CCG004396.1 C2H2 ZF 644 666
Alligator_sinensis_CCG004396.1 C2H2 ZF 672 694
Alligator_sinensis_CCG004396.1 C2H2 ZF 700 723

Links

Other C2H2 ZF family TFs
Other Alligator sinensis TFs

39 Related TFs

Name Species Gene ID Motif Evidence SR
Score		 Action
ZBTB41 Anolis carolinensis ENSACAG00000009459 N 0.807
ENSFALG00000002807 Ficedula albicollis ENSFALG00000002807 N 0.797
ENSGALG00000002305 Gallus gallus ENSGALG00000002305 N 0.797
ZBTB41 Taeniopygia guttata ENSTGUG00000004282 N 0.797
Brh_R011240 Buceros rhinoceros Brh_R011240 N 0.797
Afo_R004000 Aptenodytes forsteri Afo_R004000 N 0.797
ENSAPLG00000007731 Anas platyrhynchos ENSAPLG00000007731 N 0.797
Tal_R010443 Tyto alba Tal_R010443 N 0.797
Gfo_R006641 Geospiza fortis Gfo_R006641 N 0.797
ZBTB41 Pan troglodytes ENSPTRG00000001808 N 0.796
ENSPPYG00000000388 Pongo abelii ENSPPYG00000000388 N 0.796
ZBTB41 Otolemur garnettii ENSOGAG00000012893 N 0.796
Zbtb41 Rattus norvegicus ENSRNOG00000011137 N 0.796
ZBTB41 Tursiops truncatus ENSTTRG00000008689 N 0.796
ENSP00000356375 Macaca fascicularis ENSP00000356375 N 0.796
ENSOARG00000015070 Ovis aries ENSOARG00000015070 N 0.796
ZBTB41 Vicugna pacos ENSVPAG00000006551 N 0.796
ENSP00000356375-D1 Bos grunniens ENSP00000356375-D1 N 0.796
ZBTB41 Oryctolagus cuniculus ENSOCUG00000014765 N 0.796
ENSNLEG00000018056 Nomascus leucogenys ENSNLEG00000018056 N 0.796
ZBTB41 Gorilla gorilla ENSGGOG00000004843 N 0.796
ZBTB41 Bos taurus ENSBTAG00000002291 N 0.796
ZBTB41 Homo sapiens ENSG00000177888 N 0.796
ENSCSAG00000013610 Chlorocebus sabaeus ENSCSAG00000013610 N 0.796
ZBTB41 Canis familiaris ENSCAFG00000011381 N 0.796
ZBTB41 Loxodonta africana ENSLAFG00000012902 N 0.796
Zbtb41 Mus musculus ENSMUSG00000033964 N 0.796
ZBTB41 Callithrix jacchus ENSCJAG00000004794 N 0.796
ENSAMEG00000017562 Ailuropoda melanoleuca ENSAMEG00000017562 N 0.796
ZBTB41 Monodelphis domestica ENSMODG00000012684 N 0.796
ZBTB41 Myotis lucifugus ENSMLUG00000016964 N 0.769
zbtb41 Xenopus tropicalis XB-GENE-877334 N 0.769
Cmyd_10004225 Chelonia mydas Cmyd_10004225 N 0.768
Myotis_brandtii_ZBTB41_10008236 Myotis brandtii Myotis_brandtii_ZBTB41_10008236 N 0.765
zbtb41 Gasterosteus aculeatus ENSGACG00000016102 N 0.765
ENSONIG00000010729 Oreochromis niloticus ENSONIG00000010729 N 0.765
ENSPFOG00000006537 Poecilia formosa ENSPFOG00000006537 N 0.761
ENSXMAG00000004794 Xiphophorus maculatus ENSXMAG00000004794 N 0.759
ENSGMOG00000002344 Gadus morhua ENSGMOG00000002344 N 0.755