Alligator_sinensis_CCG004420.1 (Alligator sinensis)
C2H2 ZF

TF Information

Pfam ID Interpro ID Gene ID CIS-BP ID Sequence source
PF00096 (zf-C2H2) IPR007087 Alligator_sinensis_CCG004420.1 T133074_2.00 GigaDB (2015-Oct-22)

Directly determined binding motifs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score		 DBD
Identity
No direct experiments

Motifs from related TFs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score		 DBD
Identity
Zbtb1
M00775_2.00 		Mus musculus
NHMMCGCRHN
NDYGCGKKDN		 PBM
Weirauch et al.(2013)
pTH2366 		0.821 0.982
For this family, TFs with SR scores > 0.755 will likely have a similar motif

DNA Binding Domains

Protein ID Domain From To Sequence
Alligator_sinensis_CCG004420.1 C2H2 ZF 531 552
Alligator_sinensis_CCG004420.1 C2H2 ZF 571 597
Alligator_sinensis_CCG004420.1 C2H2 ZF 603 625
Alligator_sinensis_CCG004420.1 C2H2 ZF 659 681
Alligator_sinensis_CCG004420.1 C2H2 ZF 683 706

Links

Other C2H2 ZF family TFs
Other Alligator sinensis TFs

Invalid Input OrderBy

40 Related TFs

Name Species Gene ID Motif Evidence SR
Score		 Action