CIS-BP Database: Catalog of Inferred Sequence Binding Preferences
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Alligator_sinensis_CCG004808.1
(
Alligator sinensis
)
C2H2 ZF
TF Information
Pfam ID
Interpro ID
Gene ID
CIS-BP ID
Sequence source
PF00096 (zf-C2H2)
IPR007087
Alligator_sinensis_CCG004808.1
T133104_2.00
GigaDB (2015-Oct-22)
Directly determined binding motifs
Name/Motif ID
Species
Forward
Reverse
Type/Study/Study ID
SR
Score
DBD
Identity
No direct experiments
Motifs from related TFs
Name/Motif ID
Species
Forward
Reverse
Type/Study/Study ID
SR
Score
DBD
Identity
No TFs with similar DNA binding domains
DNA Binding Domains
Protein ID
Domain
From
To
Sequence
Alligator_sinensis_CCG004808.1
C2H2 ZF
338
359
QCSECGKHFTLSASLAEHQRIH
Alligator_sinensis_CCG004808.1
C2H2 ZF
365
387
YGCSECGKHFTHSSSLVHHQRIH
Alligator_sinensis_CCG004808.1
C2H2 ZF
393
415
HRCPECGKSFTQVSHLARHQQIH
Alligator_sinensis_CCG004808.1
C2H2 ZF
421
443
HHCPECGKSFILSSHLVRHKRIH
Alligator_sinensis_CCG004808.1
C2H2 ZF
449
471
YQCPECGKSFTQASHLARHQHIH
Alligator_sinensis_CCG004808.1
C2H2 ZF
477
498
YQCLECGKSFTRSSHLAQHQQA
Alligator_sinensis_CCG004808.1
C2H2 ZF
505
527
HQCPECGKSFIGSSQLVQHQRIH
Alligator_sinensis_CCG004808.1
C2H2 ZF
533
555
YQCPECGKSFTLSFHLTRHQRIH
Alligator_sinensis_CCG004808.1
C2H2 ZF
561
583
YQCSECGKSFTESSRLVQHQRMH
Alligator_sinensis_CCG004808.1
C2H2 ZF
589
611
HQCPECGKSFLWASQLARHQRIH
Links
Other
C2H2 ZF
family TFs
Other
Alligator sinensis
TFs
0 Related TFs
">No related TF found