CIS-BP Database: Catalog of Inferred Sequence Binding Preferences
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Alligator_sinensis_CCG004886.1
(
Alligator sinensis
)
C2H2 ZF
TF Information
Pfam ID
Interpro ID
Gene ID
CIS-BP ID
Sequence source
PF00096 (zf-C2H2)
IPR007087
Alligator_sinensis_CCG004886.1
T133110_2.00
GigaDB (2015-Oct-22)
Directly determined binding motifs
Name/Motif ID
Species
Forward
Reverse
Type/Study/Study ID
SR
Score
DBD
Identity
No direct experiments
Motifs from related TFs
Name/Motif ID
Species
Forward
Reverse
Type/Study/Study ID
SR
Score
DBD
Identity
No TFs with similar DNA binding domains
DNA Binding Domains
Protein ID
Domain
From
To
Sequence
Alligator_sinensis_CCG004886.1
C2H2 ZF
86
108
HQCSACGKSFTCSSTLARHQRIH
Alligator_sinensis_CCG004886.1
C2H2 ZF
114
136
YHCSECGKSFTYSSSLAKHKLIH
Alligator_sinensis_CCG004886.1
C2H2 ZF
142
164
YQCSECGKSFTYSSSLAKHKLIH
Alligator_sinensis_CCG004886.1
C2H2 ZF
170
192
YQCSECGKSFSSSSHLASHQRIH
Alligator_sinensis_CCG004886.1
C2H2 ZF
198
220
YQCSVCGKNFSDSSSLAKHRHIH
Alligator_sinensis_CCG004886.1
C2H2 ZF
226
248
YQCSECGKSFTYSSSLAKHKHIH
Alligator_sinensis_CCG004886.1
C2H2 ZF
254
276
YQCSECGKSFTYSSSLAKHKRIH
Alligator_sinensis_CCG004886.1
C2H2 ZF
282
304
YQCSECGKIFSYSSDLTRHQLVH
Alligator_sinensis_CCG004886.1
C2H2 ZF
310
332
YQCSECGKSFKQYTSLALHQHVH
Alligator_sinensis_CCG004886.1
C2H2 ZF
338
360
YQCSKCGKSFSSSSHLAQHQRVH
Alligator_sinensis_CCG004886.1
C2H2 ZF
366
388
YQCSECGKSYSFSSHLASHQRVH
Alligator_sinensis_CCG004886.1
C2H2 ZF
394
416
YQCSKCGKSFSYCSSLANHQRIH
Alligator_sinensis_CCG004886.1
C2H2 ZF
422
444
YQCNECGKSFSYSSSLASHQHIH
Alligator_sinensis_CCG004886.1
C2H2 ZF
450
472
YQCSECGKSFRYSPYLAKHKLIH
Alligator_sinensis_CCG004886.1
C2H2 ZF
478
500
YHCSECGKSFRYSSSLAKHKCMH
Alligator_sinensis_CCG004886.1
C2H2 ZF
506
528
YQCTECGKSFSYSSKLARHQRVH
Alligator_sinensis_CCG004886.1
C2H2 ZF
534
556
YQCCVCGKSFSVLSSLVRHQRIH
Alligator_sinensis_CCG004886.1
C2H2 ZF
562
584
YQCSLCGKQFNQSSHLAQHQHVH
Links
Other
C2H2 ZF
family TFs
Other
Alligator sinensis
TFs
0 Related TFs
">No related TF found