TF Information

Alligator_sinensis_CCG005035.1 *(Alligator sinensis)* C2H2 ZF
Pfam ID	Interpro ID	Gene ID	CIS-BP ID	Sequence source
PF00096 (zf-C2H2)	IPR007087	Alligator_sinensis_CCG005035.1	T133114_2.00	GigaDB (2015-Oct-22)
Directly determined binding motifs
Name/Motif ID	Species	Forward	Reverse	Type/Study/Study ID	SR Score	DBD Identity
No direct experiments
Motifs from related TFs
Name/Motif ID	Species	Forward	Reverse	Type/Study/Study ID	SR Score	DBD Identity
Bcl6b M00128_2.00	Mus musculus	NYYYTYCYWNNN	NNNWRGRARRRN	PBM Badis et al.(2009) Bcl6b_0961	0.794	0.843
BCL6B M02896_2.00	Homo sapiens	TGCTTTCTAGGAATTMM	KKAATTCCTAGAAAGCA	SELEX Jolma et al.(2013) BCL6B_1	0.794	0.835
BCL6B M04499_2.00	Homo sapiens	NNGCTTTCKAGGAAHN	NDTTCCTMGAAAGCNN	SELEX Yin et al.(2017) BCL6B_eDBD_HT-SELEX_1	0.794	0.835
BCL6B M04500_2.00	Homo sapiens	NDTTCCTCGATTRCVN	NBGYAATCGAGGAAHN	SELEX Yin et al.(2017) BCL6B_eDBD_HT-SELEX_2	0.794	0.835
BCL6B M04501_2.00	Homo sapiens	NHGCTTTCTAGGAAHN	NDTTCCTAGAAAGCDN	SELEX Yin et al.(2017) BCL6B_eDBD_Methyl-HT-SELEX_1	0.794	0.835
BCL6B M04502_2.00	Homo sapiens	NWTTCCTAGATTACRN	NYGTAATCTAGGAAWN	SELEX Yin et al.(2017) BCL6B_eDBD_Methyl-HT-SELEX_2	0.794	0.835
For this family, TFs with SR scores > 0.755* will likely have a similar motif*

Links
Other C2H2 ZF family TFs
Other *Alligator sinensis* TFs

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38 Related TFs

Name	Species	Gene ID	Motif Evidence	SR Score	Action