Alligator_sinensis_CCG005049.1 (Alligator sinensis)
C2H2 ZF

TF Information

Pfam ID Interpro ID Gene ID CIS-BP ID Sequence source
PF00096 (zf-C2H2) IPR007087 Alligator_sinensis_CCG005049.1 T133115_2.00 GigaDB (2015-Oct-22)

Directly determined binding motifs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score		 DBD
Identity
No direct experiments

Motifs from related TFs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score		 DBD
Identity
ZBTB7C
M02920_2.00 		Homo sapiens
DCRACCACCVHN
NDBGGTGGTYGH		 SELEX
Jolma et al.(2013)
ZBTB7C_1 		0.825 0.978
ZBTB7C
M10289_2.00 		Homo sapiens Transfac license required
 Transfac license required
 Transfac
Matys et al.(2006)
V$ZBTB7C_Q2 		0.825 0.978
For this family, TFs with SR scores > 0.755 will likely have a similar motif

DNA Binding Domains

Protein ID Domain From To Sequence
Alligator_sinensis_CCG005049.1 C2H2 ZF 122 144
Alligator_sinensis_CCG005049.1 C2H2 ZF 150 172
Alligator_sinensis_CCG005049.1 C2H2 ZF 178 200
Alligator_sinensis_CCG005049.1 C2H2 ZF 206 227

Links

Other C2H2 ZF family TFs
Other Alligator sinensis TFs

Invalid Input OrderBy

52 Related TFs

Name Species Gene ID Motif Evidence SR
Score		 Action