Alligator_sinensis_CCG006333.1 (Alligator sinensis)
C2H2 ZF

TF Information

Pfam ID Interpro ID Gene ID CIS-BP ID Sequence source
PF00096 (zf-C2H2) IPR007087 Alligator_sinensis_CCG006333.1 T133159_2.00 GigaDB (2015-Oct-22)

Directly determined binding motifs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score		 DBD
Identity
No direct experiments

Motifs from related TFs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score		 DBD
Identity
Zbtb14
M00145_2.00 		Mus musculus
NNCGHGNNN
NNNCDCGNN		 PBM
Badis et al.(2009)
Zfp161_2858 		0.779 0.983
ZBTB14
M04629_2.00 		Homo sapiens
DYGCGCGTGCACGHBN
NVDCGTGCACGCGCRH		 SELEX
Yin et al.(2017)
ZBTB14_eDBD_HT-SELEX 		0.779 0.983
ZBTB14
M04631_2.00 		Homo sapiens
HCRCGTGCACGCGCAY
RTGCGCGTGCACGYGD		 SELEX
Yin et al.(2017)
ZBTB14_FL_HT-SELEX 		0.779 0.983
ZBTB14
M08387_2.00 		Homo sapiens
SCGCGCSCS
SGSGCGCGS		 ChIP-seq
Schmitges et al.(2016)
O43829_2-4.RCADE 		0.779 0.983
ZBTB14
M08954_2.00 		Homo sapiens
GCGCGCWCN
NGWGCGCGC		 Misc
Kulakovskiy et al.(2013)
ZBT14_HUMAN.H11MO.0.C 		0.779 0.983
ZBTB14
M10316_2.00 		Homo sapiens Transfac license required
 Transfac license required
 Transfac
Matys et al.(2006)
V$ZF5_01 		0.779 0.983
ZBTB14
M10317_2.00 		Homo sapiens Transfac license required
 Transfac license required
 Transfac
Matys et al.(2006)
V$ZF5_B 		0.779 0.983
ZBTB14
M04630_2.00 		Homo sapiens
VYGCGCGYGCACGYNN
NNRCGTGCRCGCGCRB		 SELEX
Yin et al.(2017)
ZBTB14_eDBD_Methyl-HT-SELEX 		0.779 0.983
ZBTB14
M04632_2.00 		Homo sapiens
TCACGTGCACGCGCAC
GTGCGCGTGCACGTGA		 SELEX
Yin et al.(2017)
ZBTB14_FL_Methyl-HT-SELEX 		0.779 0.983
For this family, TFs with SR scores > 0.755 will likely have a similar motif

DNA Binding Domains

Protein ID Domain From To Sequence
Alligator_sinensis_CCG006333.1 C2H2 ZF 269 291
Alligator_sinensis_CCG006333.1 C2H2 ZF 297 319
Alligator_sinensis_CCG006333.1 C2H2 ZF 325 347
Alligator_sinensis_CCG006333.1 C2H2 ZF 353 375
Alligator_sinensis_CCG006333.1 C2H2 ZF 381 404

Links

Other C2H2 ZF family TFs
Other Alligator sinensis TFs

46 Related TFs

Name Species Gene ID Motif Evidence SR
Score		 Action
Ogr15623 Ophisaurus gracilis Ogr15623 I 0.827
ENSPSIG00000005537 Pelodiscus sinensis ENSPSIG00000005537 I 0.827
Pvit_14008 Pogona vitticeps Pvit_14008 I 0.827
ENSMEUG00000012751 Macropus eugenii ENSMEUG00000012751 I 0.827
ZBTB14 Monodelphis domestica ENSMODG00000021460 I 0.827
ZBTB14 Anolis carolinensis ENSACAG00000009653 I 0.827
ZBTB14 Ornithorhynchus anatinus ENSOANG00000005381 I 0.825
ZBTB14 Meleagris gallopavo ENSMGAG00000015827 I 0.818
Aan_R005355 Calypte anna Aan_R005355 I 0.818
ENSFALG00000006322 Ficedula albicollis ENSFALG00000006322 I 0.818
Afo_R005854 Aptenodytes forsteri Afo_R005854 I 0.818
Gfo_R012109 Geospiza fortis Gfo_R012109 I 0.818
Tal_R006431 Tyto alba Tal_R006431 I 0.818
ENSAPLG00000011548 Anas platyrhynchos ENSAPLG00000011548 I 0.818
ENSGALG00000014771 Gallus gallus ENSGALG00000014771 I 0.816
zbtb14 Xenopus tropicalis XB-GENE-968315 I 0.813
ENSLACG00000011224 Latimeria chalumnae ENSLACG00000011224 I 0.809
zbtb14.L Xenopus laevis XB-GENE-968318 N 0.801
ZBTB14 Pan troglodytes ENSPTRG00000029352 I 0.779
ENSPPYG00000009025 Pongo abelii ENSPPYG00000009025 I 0.779
ZBTB14 Pteropus vampyrus ENSPVAG00000012683 I 0.779
ZBTB14 Tupaia belangeri ENSTBEG00000017107 I 0.779
ENSP00000349503 Macaca fascicularis ENSP00000349503 I 0.779
ENSP00000349503-D1 Bos grunniens ENSP00000349503-D1 I 0.779
ZBTB14 Procavia capensis ENSPCAG00000008601 I 0.779
ENSSTOG00000010216 Ictidomys tridecemlineatus ENSSTOG00000010216 I 0.779
Zfp161 Rattus norvegicus ENSRNOG00000016719 I 0.779
Zbtb14 Mus musculus ENSMUSG00000049672 D 0.779
ENSCSAG00000017588 Chlorocebus sabaeus ENSCSAG00000017588 I 0.779
ENSDORG00000015193 Dipodomys ordii ENSDORG00000015193 I 0.779
ZBTB14 Equus caballus ENSECAG00000019218 I 0.779
ZBTB14 Callithrix jacchus ENSCJAG00000037461 I 0.779
ZBTB14 Choloepus hoffmanni ENSCHOG00000012883 I 0.779
ENSAMEG00000020014 Ailuropoda melanoleuca ENSAMEG00000020014 I 0.779
ZBTB14 Bos taurus ENSBTAG00000038970 I 0.779
ZBTB14 Canis familiaris ENSCAFG00000018554 I 0.779
ZBTB14 Echinops telfairi ENSETEG00000004337 I 0.779
ZBTB14 Felis catus ENSFCAG00000023573 I 0.779
ENSNLEG00000006918 Nomascus leucogenys ENSNLEG00000006918 I 0.779
ZBTB14 Oryctolagus cuniculus ENSOCUG00000004131 I 0.779
ZBTB14 Otolemur garnettii ENSOGAG00000009683 I 0.779
ENSMPUG00000004990 Mustela putorius furo ENSMPUG00000004990 I 0.779
ZBTB14 Macaca mulatta ENSMMUG00000022005 I 0.779
ZBTB14 Homo sapiens ENSG00000198081 D 0.779
ZBTB14 Gorilla gorilla ENSGGOG00000024397 I 0.779
ENSPANG00000003128 Papio anubis ENSPANG00000003128 I 0.779