CIS-BP Database: Catalog of Inferred Sequence Binding Preferences
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Alligator_sinensis_CCG006422.1
(
Alligator sinensis
)
C2H2 ZF
TF Information
Pfam ID
Interpro ID
Gene ID
CIS-BP ID
Sequence source
PF00096 (zf-C2H2)
IPR007087
Alligator_sinensis_CCG006422.1
T133166_2.00
GigaDB (2015-Oct-22)
Directly determined binding motifs
Name/Motif ID
Species
Forward
Reverse
Type/Study/Study ID
SR
Score
DBD
Identity
No direct experiments
Motifs from related TFs
Name/Motif ID
Species
Forward
Reverse
Type/Study/Study ID
SR
Score
DBD
Identity
No TFs with similar DNA binding domains
DNA Binding Domains
Protein ID
Domain
From
To
Sequence
Alligator_sinensis_CCG006422.1
C2H2 ZF
214
236
YRCDQCGKAYKHAGSLTNHRQSH
Alligator_sinensis_CCG006422.1
C2H2 ZF
241
263
YPCAVCFKEFANLMAVKNHARLH
Alligator_sinensis_CCG006422.1
C2H2 ZF
316
338
YCCGDCGRTYRHAGSLVNHRQSH
Alligator_sinensis_CCG006422.1
C2H2 ZF
343
365
YACGVCAKRLYNMAALKNHLRVH
Alligator_sinensis_CCG006422.1
C2H2 ZF
386
408
YRCGECGRTYRHRGSLVNHRHTH
Alligator_sinensis_CCG006422.1
C2H2 ZF
413
435
YRCSLCPKEYSNLMALRTHVRVH
Alligator_sinensis_CCG006422.1
C2H2 ZF
463
485
HICGACGDTFGSLGELRSHARSH
Alligator_sinensis_CCG006422.1
C2H2 ZF
493
515
FACEVCGRRYRHAASLVNHRRCH
Alligator_sinensis_CCG006422.1
C2H2 ZF
520
542
FACPLCAKALANMAALKSHLRGH
Alligator_sinensis_CCG006422.1
C2H2 ZF
732
754
YQCSLCPKEFPNLPALRCHFGAH
Alligator_sinensis_CCG006422.1
C2H2 ZF
765
788
YLCSLCGLIFPGEDDLRTHHGLAH
Alligator_sinensis_CCG006422.1
C2H2 ZF
814
836
HICGYCGQTFDDMGSLEEHSAGH
Alligator_sinensis_CCG006422.1
C2H2 ZF
863
885
YSCGQCGKTYRHGGSLVNHRKTH
Alligator_sinensis_CCG006422.1
C2H2 ZF
890
912
FPCGVCTRHYPNLSAYRNHLRNH
Alligator_sinensis_CCG006422.1
C2H2 ZF
1088
1110
FRCELCGRSYRHAGSLINHRQTH
Alligator_sinensis_CCG006422.1
C2H2 ZF
1115
1137
FRCGVCHKAFYNLMALKNHHRIH
Alligator_sinensis_CCG006422.1
C2H2 ZF
1143
1165
HRCQHCPKAFRLRKQLLSHQRGH
Links
Other
C2H2 ZF
family TFs
Other
Alligator sinensis
TFs
0 Related TFs
">No related TF found