Alligator_sinensis_CCG006627.1 (Alligator sinensis)
C2H2 ZF

TF Information

Pfam ID Interpro ID Gene ID CIS-BP ID Sequence source
PF00096 (zf-C2H2) IPR007087 Alligator_sinensis_CCG006627.1 T133177_2.00 GigaDB (2015-Oct-22)

Directly determined binding motifs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score		 DBD
Identity
No direct experiments

Motifs from related TFs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score		 DBD
Identity
Sall1
M10342_2.00 		Mus musculus Transfac license required
 Transfac license required
 Transfac
Matys et al.(2006)
V$SALL1_04 		0.827 1.000
Sall1
M10343_2.00 		Mus musculus Transfac license required
 Transfac license required
 Transfac
Matys et al.(2006)
V$SALL1_05 		0.827 1.000
Sall1
M10344_2.00 		Mus musculus Transfac license required
 Transfac license required
 Transfac
Matys et al.(2006)
V$SALL1_06 		0.827 1.000
For this family, TFs with SR scores > 0.755 will likely have a similar motif

DNA Binding Domains

Protein ID Domain From To Sequence
Alligator_sinensis_CCG006627.1 C2H2 ZF 283 305
Alligator_sinensis_CCG006627.1 C2H2 ZF 311 333
Alligator_sinensis_CCG006627.1 C2H2 ZF 566 588
Alligator_sinensis_CCG006627.1 C2H2 ZF 598 620
Alligator_sinensis_CCG006627.1 C2H2 ZF 833 855
Alligator_sinensis_CCG006627.1 C2H2 ZF 861 883
Alligator_sinensis_CCG006627.1 C2H2 ZF 966 988
Alligator_sinensis_CCG006627.1 C2H2 ZF 994 1016

Links

Other C2H2 ZF family TFs
Other Alligator sinensis TFs

Invalid Input OrderBy

50 Related TFs

Name Species Gene ID Motif Evidence SR
Score		 Action