CIS-BP Database: Catalog of Inferred Sequence Binding Preferences
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Alligator_sinensis_CCG006837.1
(
Alligator sinensis
)
C2H2 ZF
TF Information
Pfam ID
Interpro ID
Gene ID
CIS-BP ID
Sequence source
PF00096 (zf-C2H2)
IPR007087
Alligator_sinensis_CCG006837.1
T133182_2.00
GigaDB (2015-Oct-22)
Directly determined binding motifs
Name/Motif ID
Species
Forward
Reverse
Type/Study/Study ID
SR
Score
DBD
Identity
No direct experiments
Motifs from related TFs
Name/Motif ID
Species
Forward
Reverse
Type/Study/Study ID
SR
Score
DBD
Identity
No TFs with similar DNA binding domains
DNA Binding Domains
Protein ID
Domain
From
To
Sequence
Alligator_sinensis_CCG006837.1
C2H2 ZF
146
168
HQCSVCQKSFSKSSSLANHQRIH
Alligator_sinensis_CCG006837.1
C2H2 ZF
174
196
HQCCVCGKSFTRSSSLAEHHYIH
Alligator_sinensis_CCG006837.1
C2H2 ZF
202
224
HQCCVCGKSFTYPSRLARHQRIH
Alligator_sinensis_CCG006837.1
C2H2 ZF
230
252
YKCSLCGKSFSKSYGLAQHQRIH
Alligator_sinensis_CCG006837.1
C2H2 ZF
259
281
HQCSVCGKSFSQSSSLTKHQRIH
Alligator_sinensis_CCG006837.1
C2H2 ZF
287
310
YQCSECGKSFTYASSLTQHQHIHH
Alligator_sinensis_CCG006837.1
C2H2 ZF
316
338
HHCSVCGRSFSYFSYLTRHRLIH
Alligator_sinensis_CCG006837.1
C2H2 ZF
344
366
HQCTECGKSFTCSSHLARHQLIH
Alligator_sinensis_CCG006837.1
C2H2 ZF
372
394
HQCSECGKSFARSSGLAQHQLIH
Alligator_sinensis_CCG006837.1
C2H2 ZF
400
422
YNCSECGKSFTYSSNLARHQLIH
Alligator_sinensis_CCG006837.1
C2H2 ZF
428
450
YQCSVCGKSFARSSHLDKHHCIH
Alligator_sinensis_CCG006837.1
C2H2 ZF
456
478
HRCSECGKSFTSSYSLTRHQLIH
Alligator_sinensis_CCG006837.1
C2H2 ZF
484
506
YQCSECGKSFTYSSNLAEHQFIH
Alligator_sinensis_CCG006837.1
C2H2 ZF
512
534
HQCSECGKRFVRFSILAEHLCVH
Alligator_sinensis_CCG006837.1
C2H2 ZF
540
562
HRCSECGKSFTYFSSLTEHQRIH
Links
Other
C2H2 ZF
family TFs
Other
Alligator sinensis
TFs
0 Related TFs
">No related TF found