CIS-BP Database: Catalog of Inferred Sequence Binding Preferences
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Alligator_sinensis_CCG007111.1
(
Alligator sinensis
)
C2H2 ZF
TF Information
Pfam ID
Interpro ID
Gene ID
CIS-BP ID
Sequence source
PF00096 (zf-C2H2)
IPR007087
Alligator_sinensis_CCG007111.1
T133190_2.00
GigaDB (2015-Oct-22)
Directly determined binding motifs
Name/Motif ID
Species
Forward
Reverse
Type/Study/Study ID
SR
Score
DBD
Identity
No direct experiments
Motifs from related TFs
Name/Motif ID
Species
Forward
Reverse
Type/Study/Study ID
SR
Score
DBD
Identity
No TFs with similar DNA binding domains
DNA Binding Domains
Protein ID
Domain
From
To
Sequence
Alligator_sinensis_CCG007111.1
C2H2 ZF
54
76
HKCSKCGKSFTHSSSLARHQRIH
Alligator_sinensis_CCG007111.1
C2H2 ZF
110
132
HRCLECGKSFNHSSSLARHQRIH
Alligator_sinensis_CCG007111.1
C2H2 ZF
138
160
HQCLECGKSFTQSSSLARHQRIH
Alligator_sinensis_CCG007111.1
C2H2 ZF
166
188
YQCSKCGRSFTYSSTLAQHQLIH
Alligator_sinensis_CCG007111.1
C2H2 ZF
194
216
HRCSECGKSFPWCSSLARHQLVH
Alligator_sinensis_CCG007111.1
C2H2 ZF
222
244
YQCSECGKSFTRSSSLAQHQHIH
Alligator_sinensis_CCG007111.1
C2H2 ZF
250
272
YTCSKCGKSFIHSSSLAQHQRIH
Alligator_sinensis_CCG007111.1
C2H2 ZF
279
300
RCSECGKSFTCFSSLTQHQRIH
Alligator_sinensis_CCG007111.1
C2H2 ZF
306
329
HQCMECGKSFAQSSSLAQHHRSIH
Alligator_sinensis_CCG007111.1
C2H2 ZF
335
357
HQCLECGKTFTQASRLAEHQRIH
Alligator_sinensis_CCG007111.1
C2H2 ZF
363
385
YQCSECGKSFSRSFRLAQHQRIH
Alligator_sinensis_CCG007111.1
C2H2 ZF
391
413
YRCSECGKSFTHSSSLAEHQRIH
Alligator_sinensis_CCG007111.1
C2H2 ZF
419
441
YQCTECGKSFTQSSILTRHQRVH
Alligator_sinensis_CCG007111.1
C2H2 ZF
447
469
HQCTECGKSFIQSSNLTRHQRVH
Links
Other
C2H2 ZF
family TFs
Other
Alligator sinensis
TFs
0 Related TFs
">No related TF found