CIS-BP Database: Catalog of Inferred Sequence Binding Preferences
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Alligator_sinensis_CCG007225.1
(
Alligator sinensis
)
C2H2 ZF
TF Information
Pfam ID
Interpro ID
Gene ID
CIS-BP ID
Sequence source
PF00096 (zf-C2H2)
IPR007087
Alligator_sinensis_CCG007225.1
T133197_2.00
GigaDB (2015-Oct-22)
Directly determined binding motifs
Name/Motif ID
Species
Forward
Reverse
Type/Study/Study ID
SR
Score
DBD
Identity
No direct experiments
Motifs from related TFs
Name/Motif ID
Species
Forward
Reverse
Type/Study/Study ID
SR
Score
DBD
Identity
No TFs with similar DNA binding domains
DNA Binding Domains
Protein ID
Domain
From
To
Sequence
Alligator_sinensis_CCG007225.1
C2H2 ZF
230
252
YQCRECGEPCRDQQELGAHRASH
Alligator_sinensis_CCG007225.1
C2H2 ZF
258
280
HPCTSCGKSFWLQSSLINHQKTH
Alligator_sinensis_CCG007225.1
C2H2 ZF
286
308
YLCPDCGKSFVHLHVLRVHRRIH
Alligator_sinensis_CCG007225.1
C2H2 ZF
314
336
YCCQECGKSFQQGGGLTAHQRIH
Alligator_sinensis_CCG007225.1
C2H2 ZF
342
364
YSCLECGKSFYHRGGLAAHRRVH
Alligator_sinensis_CCG007225.1
C2H2 ZF
370
392
YRCEECGRSFRQQGALTVHQRLH
Alligator_sinensis_CCG007225.1
C2H2 ZF
398
420
YRCEECGRSFRHALGLTFHRRLH
Alligator_sinensis_CCG007225.1
C2H2 ZF
426
448
YRCVACGKCFSHSSALTVHQRSH
Alligator_sinensis_CCG007225.1
C2H2 ZF
454
476
FHCADCGKSFAQQQNLQTHQRVH
Alligator_sinensis_CCG007225.1
C2H2 ZF
482
504
YGCAQCGKSFTRQQNLQAHQRIH
Alligator_sinensis_CCG007225.1
C2H2 ZF
510
532
YHCGKCGKSFSRQQHLQAHQRVH
Alligator_sinensis_CCG007225.1
C2H2 ZF
538
560
YLCAHCGKSFRESSTLTDHQRLH
Alligator_sinensis_CCG007225.1
C2H2 ZF
566
588
FRCTECEKSFVNASALTRHRRIH
Alligator_sinensis_CCG007225.1
C2H2 ZF
594
616
YCCVDCGRSFRWQGVLMAHRRIH
Alligator_sinensis_CCG007225.1
C2H2 ZF
622
644
YGCADCGKSFRHGSALTLHQRSH
Links
Other
C2H2 ZF
family TFs
Other
Alligator sinensis
TFs
0 Related TFs
">No related TF found