CIS-BP Database: Catalog of Inferred Sequence Binding Preferences
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Alligator_sinensis_CCG007923.1
(
Alligator sinensis
)
C2H2 ZF
TF Information
Pfam ID
Interpro ID
Gene ID
CIS-BP ID
Sequence source
PF00096 (zf-C2H2)
IPR007087
Alligator_sinensis_CCG007923.1
T133215_2.00
GigaDB (2015-Oct-22)
Directly determined binding motifs
Name/Motif ID
Species
Forward
Reverse
Type/Study/Study ID
SR
Score
DBD
Identity
No direct experiments
Motifs from related TFs
Name/Motif ID
Species
Forward
Reverse
Type/Study/Study ID
SR
Score
DBD
Identity
No TFs with similar DNA binding domains
DNA Binding Domains
Protein ID
Domain
From
To
Sequence
Alligator_sinensis_CCG007923.1
C2H2 ZF
231
253
YRCAECKKSFTKWDHLQSHMCMH
Alligator_sinensis_CCG007923.1
C2H2 ZF
259
281
FSCQQCGESFAKSSMLVQHLRVH
Alligator_sinensis_CCG007923.1
C2H2 ZF
287
309
FSCGQCGKSFSKSSTLTKHLRVH
Alligator_sinensis_CCG007923.1
C2H2 ZF
315
337
FSCSHCGKSFTQSSHLTNHLRLH
Alligator_sinensis_CCG007923.1
C2H2 ZF
343
365
FCCSQCGKSFRQSSNLIYHLRMH
Alligator_sinensis_CCG007923.1
C2H2 ZF
371
393
FSCRHCGKSFMQSSHLTNHLRVH
Alligator_sinensis_CCG007923.1
C2H2 ZF
399
421
FCCCQCGKSFTQSSKLTNHLRVH
Alligator_sinensis_CCG007923.1
C2H2 ZF
427
449
FSCSQCGKSFRQSSTLTTHLRVH
Alligator_sinensis_CCG007923.1
C2H2 ZF
455
477
FSCTQCEKSFSDSSTLMYHLRVH
Alligator_sinensis_CCG007923.1
C2H2 ZF
483
505
FSCTQCGKSFTKGYKLKNHLRVH
Alligator_sinensis_CCG007923.1
C2H2 ZF
511
533
FSCTQCEKSFTDSSMLTSHLRMH
Alligator_sinensis_CCG007923.1
C2H2 ZF
539
561
FSCTQCGKTFTKSYTLTQHLRVH
Alligator_sinensis_CCG007923.1
C2H2 ZF
567
589
FCCSQCGKRFRQSSNLTYHLRVH
Alligator_sinensis_CCG007923.1
C2H2 ZF
595
617
FSCSQCGKSFTQSSKLTSHLRVH
Alligator_sinensis_CCG007923.1
C2H2 ZF
623
645
FSCTQCGKSFTQSSNLTNHLRVH
Alligator_sinensis_CCG007923.1
C2H2 ZF
651
673
FSCSQCGKSFTQSYKLTNHLRVH
Alligator_sinensis_CCG007923.1
C2H2 ZF
679
701
FSCSQCGKSFTLSSTLTTHLRVH
Alligator_sinensis_CCG007923.1
C2H2 ZF
707
729
FSCTQCEKSFSDSSTLTYHLRVH
Alligator_sinensis_CCG007923.1
C2H2 ZF
735
757
FACTQCGKSFTKSSKLKSHLHVH
Alligator_sinensis_CCG007923.1
C2H2 ZF
763
785
FSCTQCEKSFAESSRLASHMRVH
Alligator_sinensis_CCG007923.1
C2H2 ZF
791
813
FSCTQCGKTFTKRSTLMQHQRMH
Alligator_sinensis_CCG007923.1
C2H2 ZF
819
841
FHCSQCGKSFTESSKLTRHLRVH
Alligator_sinensis_CCG007923.1
C2H2 ZF
847
869
FSCSQCGKSFTESSTLRQHLRVH
Alligator_sinensis_CCG007923.1
C2H2 ZF
875
897
FSCTHCGKSFVERSKLNKHLRVH
Alligator_sinensis_CCG007923.1
C2H2 ZF
903
925
FSCPQCGKSFTDSSTLTKHRRVH
Alligator_sinensis_CCG007923.1
C2H2 ZF
931
953
YRCAQCQKCFRQSSTLRKHQQTH
Links
Other
C2H2 ZF
family TFs
Other
Alligator sinensis
TFs
0 Related TFs
">No related TF found