TF Information

Alligator_sinensis_CCG008952.1 *(Alligator sinensis)* C2H2 ZF
Pfam ID	Interpro ID	Gene ID	CIS-BP ID	Sequence source
PF00096 (zf-C2H2)	IPR007087	Alligator_sinensis_CCG008952.1	T133235_2.00	GigaDB (2015-Oct-22)
Directly determined binding motifs
Name/Motif ID	Species	Forward	Reverse	Type/Study/Study ID	SR Score	DBD Identity
No direct experiments
Motifs from related TFs
Name/Motif ID	Species	Forward	Reverse	Type/Study/Study ID	SR Score	DBD Identity
Hic1 M00141_2.00	Mus musculus	RTGCCMNBN	NVNKGGCAY	PBM Badis et al.(2009) Hic1_2816	0.827	0.991
Hic1 M02933_2.00	Mus musculus	RTGCCAVCYBRTGCCAVC	GBTGGCAYVRGBTGGCAY	SELEX Jolma et al.(2013) Hic1_1	0.827	0.991
Hic1 M02934_2.00	Mus musculus	RTGCCAVCN	NGBTGGCAY	SELEX Jolma et al.(2013) Hic1_2	0.827	0.991
Hic1 M09003_2.00	Mus musculus	KGGCAMCCH	DGGKTGCCM	Misc Kulakovskiy et al.(2013) HIC1_MOUSE.H11MO.0.C	0.827	0.991
HIC2 M02902_2.00	Homo sapiens	RTGCCMVNN	NNBKGGCAY	SELEX Jolma et al.(2013) HIC2_1	0.795	0.852
For this family, TFs with SR scores > 0.755* will likely have a similar motif*

Links
Other C2H2 ZF family TFs
Other *Alligator sinensis* TFs

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63 Related TFs

Name	Species	Gene ID	Motif Evidence	SR Score	Action