Alligator_sinensis_CCG009047.1 (Alligator sinensis)
C2H2 ZF

TF Information

Pfam ID Interpro ID Gene ID CIS-BP ID Sequence source
PF00096 (zf-C2H2) IPR007087 Alligator_sinensis_CCG009047.1 T133238_2.00 GigaDB (2015-Oct-22)

Directly determined binding motifs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score		 DBD
Identity
No direct experiments

Motifs from related TFs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score		 DBD
Identity
ZNF276
M04495_2.00 		Homo sapiens
NWAAGGWSGWVDMKACNHCCTTWAN
NTWAAGGDNGTMKHBWCSWCCTTWN		 SELEX
Yin et al.(2017)
ZNF276_eDBD_HT-SELEX 		0.816 0.974
ZNF276
M04496_2.00 		Homo sapiens
STTAAGGBSGWVWATACYHCCTTAMN
NKTAAGGDRGTATWBWCSVCCTTAAS		 SELEX
Yin et al.(2017)
ZNF276_eDBD_Methyl-HT-SELEX 		0.816 0.974
For this family, TFs with SR scores > 0.755 will likely have a similar motif

DNA Binding Domains

Protein ID Domain From To Sequence
Alligator_sinensis_CCG009047.1 C2H2 ZF 292 317
Alligator_sinensis_CCG009047.1 C2H2 ZF 324 348
Alligator_sinensis_CCG009047.1 C2H2 ZF 354 376
Alligator_sinensis_CCG009047.1 C2H2 ZF 382 404
Alligator_sinensis_CCG009047.1 C2H2 ZF 412 435

Links

Other C2H2 ZF family TFs
Other Alligator sinensis TFs

Invalid Input OrderBy

67 Related TFs

Name Species Gene ID Motif Evidence SR
Score		 Action