Alligator_sinensis_CCG010682.1 (Alligator sinensis)
C2H2 ZF

TF Information

Pfam ID Interpro ID Gene ID CIS-BP ID Sequence source
PF00096 (zf-C2H2) IPR007087 Alligator_sinensis_CCG010682.1 T133262_2.00 GigaDB (2015-Oct-22)

Directly determined binding motifs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score
DBD
Identity
No direct experiments

Motifs from related TFs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score
DBD
Identity
ZBTB48
M08391_2.00
Homo sapiens
HHDNTCCCTDR

YHAGGGANHDD
ChIP-seq
Schmitges et al.(2016)
P10074.MEME
0.812 0.961
ZBTB48
M08956_2.00
Homo sapiens
BHBRVTCCCTDR

YHAGGGABYVDV
Misc
Kulakovskiy et al.(2013)
ZBT48_HUMAN.H11MO.0.C
0.812 0.961
For this family, TFs with SR scores > 0.755 will likely have a similar motif

DNA Binding Domains

Protein ID Domain From To Sequence
Alligator_sinensis_CCG010682.1 C2H2 ZF 302 324
Alligator_sinensis_CCG010682.1 C2H2 ZF 330 351
Alligator_sinensis_CCG010682.1 C2H2 ZF 361 383
Alligator_sinensis_CCG010682.1 C2H2 ZF 389 412
Alligator_sinensis_CCG010682.1 C2H2 ZF 447 470
Alligator_sinensis_CCG010682.1 C2H2 ZF 476 498
Alligator_sinensis_CCG010682.1 C2H2 ZF 504 526
Alligator_sinensis_CCG010682.1 C2H2 ZF 532 555
Alligator_sinensis_CCG010682.1 C2H2 ZF 561 583
Alligator_sinensis_CCG010682.1 C2H2 ZF 589 611

Links

Other C2H2 ZF family TFs
Other Alligator sinensis TFs

Invalid Input OrderBy

39 Related TFs

Name Species Gene ID Motif Evidence SR
Score
Action