Alligator_sinensis_CCG011602.1 (Alligator sinensis)
C2H2 ZF

TF Information

Pfam ID Interpro ID Gene ID CIS-BP ID Sequence source
PF00096 (zf-C2H2) IPR007087 Alligator_sinensis_CCG011602.1 T133285_2.00 GigaDB (2015-Oct-22)

Directly determined binding motifs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score		 DBD
Identity
No direct experiments

Motifs from related TFs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score		 DBD
Identity
PRDM16
M10223_2.00 		Homo sapiens Transfac license required
 Transfac license required
 Transfac
Matys et al.(2006)
V$PRDM16_03 		0.825 0.987
PRDM16
M10224_2.00 		Homo sapiens Transfac license required
 Transfac license required
 Transfac
Matys et al.(2006)
V$PRDM16_04 		0.825 0.987
PRDM16
M10225_2.00 		Homo sapiens Transfac license required
 Transfac license required
 Transfac
Matys et al.(2006)
V$PRDM16_05 		0.825 0.987
For this family, TFs with SR scores > 0.755 will likely have a similar motif

DNA Binding Domains

Protein ID Domain From To Sequence
Alligator_sinensis_CCG011602.1 C2H2 ZF 167 188
Alligator_sinensis_CCG011602.1 C2H2 ZF 215 237
Alligator_sinensis_CCG011602.1 C2H2 ZF 243 265
Alligator_sinensis_CCG011602.1 C2H2 ZF 271 294
Alligator_sinensis_CCG011602.1 C2H2 ZF 300 322
Alligator_sinensis_CCG011602.1 C2H2 ZF 328 350
Alligator_sinensis_CCG011602.1 C2H2 ZF 357 378
Alligator_sinensis_CCG011602.1 C2H2 ZF 880 902
Alligator_sinensis_CCG011602.1 C2H2 ZF 908 931
Alligator_sinensis_CCG011602.1 C2H2 ZF 937 959

Links

Other C2H2 ZF family TFs
Other Alligator sinensis TFs

Invalid Input OrderBy

34 Related TFs

Name Species Gene ID Motif Evidence SR
Score		 Action