Alligator_sinensis_CCG012951.1 (Alligator sinensis)
C2H2 ZF

TF Information

Pfam ID Interpro ID Gene ID CIS-BP ID Sequence source
PF00096 (zf-C2H2) IPR007087 Alligator_sinensis_CCG012951.1 T133298_2.00 GigaDB (2015-Oct-22)

Directly determined binding motifs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score
DBD
Identity
No direct experiments

Motifs from related TFs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score
DBD
Identity
WT1
M00249_2.00
Homo sapiens
NCYCCCCCVNN

NNBGGGGGRGN
PBM
Barrera et al.(2016)
WT1_REF
0.827 1.000
WT1
M08937_2.00
Homo sapiens
YYYCBBYYCCTCCYYCNCBY

RVGNGRRGGAGGRRVVGRRR
Misc
Kulakovskiy et al.(2013)
WT1_HUMAN.H11MO.0.C
0.827 1.000
Wt1
M08968_2.00
Mus musculus
YYYCBBYYCCTCCYYCNCBY

RVGNGRRGGAGGRRVVGRRR
Misc
Kulakovskiy et al.(2013)
WT1_MOUSE.H11MO.0.B
0.827 1.000
Wt1
M10337_2.00
Mus musculus Transfac license required
Transfac license required
Transfac
Matys et al.(2006)
V$WT1_02
0.827 1.000
WT1
M10290_2.00
Homo sapiens Transfac license required
Transfac license required
Transfac
Matys et al.(2006)
V$WT1_Q4
0.827 1.000
WT1
M10291_2.00
Homo sapiens Transfac license required
Transfac license required
Transfac
Matys et al.(2006)
V$WT1_Q6_01
0.827 1.000
WT1
M10292_2.00
Homo sapiens Transfac license required
Transfac license required
Transfac
Matys et al.(2006)
V$WT1_Q6_02
0.827 1.000
WT1
M10293_2.00
Homo sapiens Transfac license required
Transfac license required
Transfac
Matys et al.(2006)
V$WT1_Q6
0.827 1.000
WT1
M00244_2.00
Homo sapiens
NNNWAMWATATN

NATATWKTWNNN
PBM
Barrera et al.(2016)
WT1_H373Y
0.827 0.989
WT1
M00245_2.00
Homo sapiens
NNNNNNN

NNNNNNN
PBM
Barrera et al.(2016)
WT1_R366C
0.826 0.989
WT1
M00246_2.00
Homo sapiens
NNNNNNN

NNNNNNN
PBM
Barrera et al.(2016)
WT1_R366L
0.826 0.989
WT1
M00247_2.00
Homo sapiens
NWATATDAHNN

NNDTHATATWN
PBM
Barrera et al.(2016)
WT1_R394L
0.826 0.989
WT1
M00248_2.00
Homo sapiens
NNTATTWTATNNN

NNNATAWAATANN
PBM
Barrera et al.(2016)
WT1_R394W
0.826 0.989
WT1
M00243_2.00
Homo sapiens
NNNNNNN

NNNNNNN
PBM
Barrera et al.(2016)
WT1_F392L
0.820 0.989
For this family, TFs with SR scores > 0.755 will likely have a similar motif

DNA Binding Domains

Protein ID Domain From To Sequence
Alligator_sinensis_CCG012951.1 C2H2 ZF 207 231
Alligator_sinensis_CCG012951.1 C2H2 ZF 237 261
Alligator_sinensis_CCG012951.1 C2H2 ZF 267 289
Alligator_sinensis_CCG012951.1 C2H2 ZF 295 319

Links

Other C2H2 ZF family TFs
Other Alligator sinensis TFs

Invalid Input OrderBy

73 Related TFs

Name Species Gene ID Motif Evidence SR
Score
Action