Alligator_sinensis_CCG014066.1 (Alligator sinensis)
C2H2 ZF

TF Information

Pfam ID Interpro ID Gene ID CIS-BP ID Sequence source
PF00096 (zf-C2H2) IPR007087 Alligator_sinensis_CCG014066.1 T133314_2.00 GigaDB (2015-Oct-22)

Directly determined binding motifs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score
DBD
Identity
No direct experiments

Motifs from related TFs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score
DBD
Identity
ZNF148
M10238_2.00
Homo sapiens Transfac license required
Transfac license required
Transfac
Matys et al.(2006)
V$CACCCBINDINGFACTOR_Q6
0.815 0.989
ZNF148
M10239_2.00
Homo sapiens Transfac license required
Transfac license required
Transfac
Matys et al.(2006)
V$ZBP89_Q4_01
0.815 0.989
ZNF148
M10240_2.00
Homo sapiens Transfac license required
Transfac license required
Transfac
Matys et al.(2006)
V$ZBP89_Q4
0.815 0.989
For this family, TFs with SR scores > 0.755 will likely have a similar motif

DNA Binding Domains

Protein ID Domain From To Sequence
Alligator_sinensis_CCG014066.1 C2H2 ZF 235 257
Alligator_sinensis_CCG014066.1 C2H2 ZF 263 285
Alligator_sinensis_CCG014066.1 C2H2 ZF 291 313
Alligator_sinensis_CCG014066.1 C2H2 ZF 319 342

Links

Other C2H2 ZF family TFs
Other Alligator sinensis TFs

Invalid Input OrderBy

66 Related TFs

Name Species Gene ID Motif Evidence SR
Score
Action