CIS-BP Database: Catalog of Inferred Sequence Binding Preferences
Home
Tools
View cart
Bulk downloads
Database stats
Contact us
Help
Update Log
FAQ
Links
How to cite
Alligator_sinensis_CCG014066.1
(
Alligator sinensis
)
C2H2 ZF
TF Information
Pfam ID
Interpro ID
Gene ID
CIS-BP ID
Sequence source
PF00096 (zf-C2H2)
IPR007087
Alligator_sinensis_CCG014066.1
T133314_2.00
GigaDB (2015-Oct-22)
Directly determined binding motifs
Name/Motif ID
Species
Forward
Reverse
Type/Study/Study ID
SR
Score
DBD
Identity
No direct experiments
Motifs from related TFs
Name/Motif ID
Species
Forward
Reverse
Type/Study/Study ID
SR
Score
DBD
Identity
ZNF148
M10238_2.00
Homo sapiens
Transfac license required
Transfac license required
Transfac
Matys et al.(2006)
V$CACCCBINDINGFACTOR_Q6
0.815
0.989
ZNF148
M10239_2.00
Homo sapiens
Transfac license required
Transfac license required
Transfac
Matys et al.(2006)
V$ZBP89_Q4_01
0.815
0.989
ZNF148
M10240_2.00
Homo sapiens
Transfac license required
Transfac license required
Transfac
Matys et al.(2006)
V$ZBP89_Q4
0.815
0.989
For this family, TFs with SR scores >
0.755
will likely have a similar motif
DNA Binding Domains
Protein ID
Domain
From
To
Sequence
Alligator_sinensis_CCG014066.1
C2H2 ZF
235
257
HVCEHCNAAFRTNYHLQRHVFIH
Alligator_sinensis_CCG014066.1
C2H2 ZF
263
285
FQCSQCDMRFIQKYLLQRHEKIH
Alligator_sinensis_CCG014066.1
C2H2 ZF
291
313
FHCDECGMRFIQKYHMERHKRTH
Alligator_sinensis_CCG014066.1
C2H2 ZF
319
342
YQCEYCLQYFSRTDRVLKHKRMCH
Links
Other
C2H2 ZF
family TFs
Other
Alligator sinensis
TFs
66 Related TFs
Name
Species
Gene ID
Motif Evidence
SR
Score
Action
Invalid Input OrderBy