Alligator_sinensis_CCG014487.1 (Alligator sinensis)
C2H2 ZF

TF Information

Pfam ID Interpro ID Gene ID CIS-BP ID Sequence source
PF00096 (zf-C2H2) IPR007087 Alligator_sinensis_CCG014487.1 T133322_2.00 GigaDB (2015-Oct-22)

Directly determined binding motifs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score		 DBD
Identity
No direct experiments

Motifs from related TFs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score		 DBD
Identity
Zfp652
M02938_2.00 		Mus musculus
DTTAACCCTTTVN
NBAAAGGGTTAAH		 SELEX
Jolma et al.(2013)
Zfp652_1 		0.822 0.995
For this family, TFs with SR scores > 0.755 will likely have a similar motif

DNA Binding Domains

Protein ID Domain From To Sequence
Alligator_sinensis_CCG014487.1 C2H2 ZF 215 238
Alligator_sinensis_CCG014487.1 C2H2 ZF 243 263
Alligator_sinensis_CCG014487.1 C2H2 ZF 269 292
Alligator_sinensis_CCG014487.1 C2H2 ZF 299 321
Alligator_sinensis_CCG014487.1 C2H2 ZF 327 349
Alligator_sinensis_CCG014487.1 C2H2 ZF 355 377
Alligator_sinensis_CCG014487.1 C2H2 ZF 383 405
Alligator_sinensis_CCG014487.1 C2H2 ZF 411 433
Alligator_sinensis_CCG014487.1 C2H2 ZF 439 460

Links

Other C2H2 ZF family TFs
Other Alligator sinensis TFs

Invalid Input OrderBy

54 Related TFs

Name Species Gene ID Motif Evidence SR
Score		 Action