Alligator_sinensis_CCG015430.1 (Alligator sinensis)
C2H2 ZF

TF Information

Pfam ID Interpro ID Gene ID CIS-BP ID Sequence source
PF00096 (zf-C2H2) IPR007087 Alligator_sinensis_CCG015430.1 T133340_2.00 GigaDB (2015-Oct-22)

Directly determined binding motifs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score
DBD
Identity
No direct experiments

Motifs from related TFs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score
DBD
Identity
No TFs with similar DNA binding domains

DNA Binding Domains

Protein ID Domain From To Sequence
Alligator_sinensis_CCG015430.1 C2H2 ZF 166 188
Alligator_sinensis_CCG015430.1 C2H2 ZF 196 218
Alligator_sinensis_CCG015430.1 C2H2 ZF 976 998
Alligator_sinensis_CCG015430.1 C2H2 ZF 1033 1056

Links

Other C2H2 ZF family TFs
Other Alligator sinensis TFs

26 Related TFs

Name Species Gene ID Motif Evidence SR
Score
Action
Cmyd_10020922 Chelonia mydas Cmyd_10020922 N 0.827
ENSAPLG00000014764 Anas platyrhynchos ENSAPLG00000014764 N 0.827
Ogr07692 Ophisaurus gracilis Ogr07692 N 0.827
Myotis_brandtii_PRDM2_10022047 Myotis brandtii Myotis_brandtii_PRDM2_10022047 N 0.825
PRDM2 Myotis lucifugus ENSMLUG00000006969 N 0.825
ENSMPUG00000016352 Mustela putorius furo ENSMPUG00000016352 N 0.825
ENSAMEG00000006714 Ailuropoda melanoleuca ENSAMEG00000006714 N 0.825
ENSCAFG00000016361 Canis familiaris ENSCAFG00000016361 N 0.825
PRDM2 Erinaceus europaeus ENSEEUG00000014607 N 0.824
ENSPSIG00000005394 Pelodiscus sinensis ENSPSIG00000005394 N 0.822
Aan_R001472 Calypte anna Aan_R001472 N 0.822
PRDM2 Ornithorhynchus anatinus ENSOANG00000009908 N 0.822
Brh_R004016 Buceros rhinoceros Brh_R004016 N 0.822
Gfo_R002647 Geospiza fortis Gfo_R002647 N 0.822
Afo_R013021 Aptenodytes forsteri Afo_R013021 N 0.822
ENSFALG00000009941 Ficedula albicollis ENSFALG00000009941 N 0.822
ENSP00000235372-D1 Bos grunniens ENSP00000235372-D1 N 0.820
PRDM2 Tursiops truncatus ENSTTRG00000005029 N 0.820
PRDM2 Equus caballus ENSECAG00000008911 N 0.820
PRDM2 Bos taurus ENSBTAG00000020552 N 0.819
ENSGALG00000004089 Gallus gallus ENSGALG00000004089 N 0.815
PRDM2 Meleagris gallopavo ENSMGAG00000005888 N 0.815
prdm2 Xenopus tropicalis XB-GENE-5957530 N 0.804
PRDM2 Anolis carolinensis ENSACAG00000010749 N 0.784
ENSLACG00000004511 Latimeria chalumnae ENSLACG00000004511 N 0.760
prdm2.S Xenopus laevis XB-GENE-5957570 N 0.758